Literature DB >> 21734575

Extracting functional networks with spatial independent component analysis: the role of dimensionality, reliability and aggregation scheme.

Fabrizio Esposito1, Rainer Goebel.   

Abstract

PURPOSE OF REVIEW: Clinical studies have differentiated functional brain networks in neurological patient and control populations using independent component analysis (ICA) applied to functional MRI (fMRI). Principal component analysis (PCA) is used to reduce the data dimensionality to make this feasible. The role of this choice is reviewed in connection with the accuracy and the reliability of the ICA results and the schemes of data aggregation in population studies. RECENT
FINDINGS: It has been pointed out recently that it is important to critically explore the ICA model orders without relying on strictly predetermined PCA cutoffs for the number of components. We further illustrate this aspect empirically by showing that a large enough range of dimensions may exist where ICA components remain accurate but also that the minimum PCA dimension required to reliably extract the best ICA maps may vary substantially across subjects. Moreover, with the aid of a simple simulation, we show that reliable independent components can still be recovered beyond a theoretical PCA cutoff.
SUMMARY: The role of the PCA cutoff and its impact on the accuracy and reliability of the ICA results should be carefully considered in future clinical fMRI studies.

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Mesh:

Year:  2011        PMID: 21734575     DOI: 10.1097/WCO.0b013e32834897a5

Source DB:  PubMed          Journal:  Curr Opin Neurol        ISSN: 1350-7540            Impact factor:   5.710


  16 in total

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Authors:  Najmeh Khalili-Mahani; Serge A R B Rombouts; Matthias J P van Osch; Eugene P Duff; Felix Carbonell; Lisa D Nickerson; Lino Becerra; Albert Dahan; Alan C Evans; Jean-Paul Soucy; Richard Wise; Alex P Zijdenbos; Joop M van Gerven
Journal:  Hum Brain Mapp       Date:  2017-02-01       Impact factor: 5.038

2.  Stochastic Rank Aggregation for the Identification of Functional Neuromarkers.

Authors:  Paola Galdi; Michele Fratello; Francesca Trojsi; Antonio Russo; Gioacchino Tedeschi; Roberto Tagliaferri; Fabrizio Esposito
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3.  Improved correspondence of resting-state networks after macroanatomical alignment.

Authors:  Martin A Frost; Fabrizio Esposito; Rainer Goebel
Journal:  Hum Brain Mapp       Date:  2012-11-14       Impact factor: 5.038

4.  Task-related concurrent but opposite modulations of overlapping functional networks as revealed by spatial ICA.

Authors:  Jiansong Xu; Sheng Zhang; Vince D Calhoun; John Monterosso; Chiang-Shan R Li; Patrick D Worhunsky; Michael Stevens; Godfrey D Pearlson; Marc N Potenza
Journal:  Neuroimage       Date:  2013-04-21       Impact factor: 6.556

Review 5.  Neuroimaging of reward mechanisms in Gambling disorder: an integrative review.

Authors:  Luke Clark; Isabelle Boileau; Martin Zack
Journal:  Mol Psychiatry       Date:  2018-09-13       Impact factor: 15.992

6.  Functional connectivity in the developing brain: a longitudinal study from 4 to 9months of age.

Authors:  E Damaraju; A Caprihan; J R Lowe; E A Allen; V D Calhoun; J P Phillips
Journal:  Neuroimage       Date:  2013-08-27       Impact factor: 6.556

7.  SimTB, a simulation toolbox for fMRI data under a model of spatiotemporal separability.

Authors:  Erik B Erhardt; Elena A Allen; Yonghua Wei; Tom Eichele; Vince D Calhoun
Journal:  Neuroimage       Date:  2011-12-08       Impact factor: 6.556

8.  EEG-fMRI Methods for the Study of Brain Networks during Sleep.

Authors:  Jeff H Duyn
Journal:  Front Neurol       Date:  2012-07-02       Impact factor: 4.003

9.  Shifted coupling of EEG driving frequencies and fMRI resting state networks in schizophrenia spectrum disorders.

Authors:  Nadja Razavi; Kay Jann; Thomas Koenig; Mara Kottlow; Martinus Hauf; Werner Strik; Thomas Dierks
Journal:  PLoS One       Date:  2013-10-04       Impact factor: 3.240

10.  Resting state fMRI reveals a default mode dissociation between retrosplenial and medial prefrontal subnetworks in ASD despite motion scrubbing.

Authors:  Tuomo Starck; Juha Nikkinen; Jukka Rahko; Jukka Remes; Tuula Hurtig; Helena Haapsamo; Katja Jussila; Sanna Kuusikko-Gauffin; Marja-Leena Mattila; Eira Jansson-Verkasalo; David L Pauls; Hanna Ebeling; Irma Moilanen; Osmo Tervonen; Vesa J Kiviniemi
Journal:  Front Hum Neurosci       Date:  2013-11-22       Impact factor: 3.169

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