Literature DB >> 21730152

Transcriptome transfer provides a model for understanding the phenotype of cardiomyocytes.

Tae Kyung Kim1, Jai-Yoon Sul, Nataliya B Peternko, Jae Hee Lee, Miler Lee, Vickas V Patel, Junhyong Kim, James H Eberwine.   

Abstract

We show that the transfer of the adult ventricular myocyte (AVM) transcriptome into either a fibroblast or an astrocyte converts the host cell into a cardiomyocyte. Transcriptome-effected cardiomyocytes (tCardiomyocytes) display morphologies, immunocytochemical properties, and expression profiles of postnatal cardiomyocytes. Cell morphology analysis shows that tCardiomyoctes are elongated and have a similar length-to-width ratio as AVMs. These global phenotypic changes occur in a time-dependent manner and confer electroexcitability to the tCardiomyocytes. tCardiomyocyte generation does not require continuous overexpression of specific transcription factors; for example, the expression level of transcription factor Mef2c is higher in tCardiomyocytes than in fibroblasts, but similar in tCardiomyocytes and AVMs. These data highlight the dominant role of the gene expression profile in developing and maintaining cellular phenotype. The transcriptome-induced phenotype remodeling-generated tCardiomyocyte has significant implications for understanding and modulating cardiac disease development.

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Year:  2011        PMID: 21730152      PMCID: PMC3141937          DOI: 10.1073/pnas.1101223108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  34 in total

1.  Summaries of Affymetrix GeneChip probe level data.

Authors:  Rafael A Irizarry; Benjamin M Bolstad; Francois Collin; Leslie M Cope; Bridget Hobbs; Terence P Speed
Journal:  Nucleic Acids Res       Date:  2003-02-15       Impact factor: 16.971

2.  DAVID: Database for Annotation, Visualization, and Integrated Discovery.

Authors:  Glynn Dennis; Brad T Sherman; Douglas A Hosack; Jun Yang; Wei Gao; H Clifford Lane; Richard A Lempicki
Journal:  Genome Biol       Date:  2003-04-03       Impact factor: 13.583

3.  RNA: state memory and mediator of cellular phenotype.

Authors:  Junhyong Kim; James Eberwine
Journal:  Trends Cell Biol       Date:  2010-04-09       Impact factor: 20.808

4.  Hemangioblastic derivatives from human induced pluripotent stem cells exhibit limited expansion and early senescence.

Authors:  Qiang Feng; Shi-Jiang Lu; Irina Klimanskaya; Ignatius Gomes; Dohoon Kim; Young Chung; George R Honig; Kwang-Soo Kim; Robert Lanza
Journal:  Stem Cells       Date:  2010-04       Impact factor: 6.277

5.  Direct reprogramming of fibroblasts into functional cardiomyocytes by defined factors.

Authors:  Masaki Ieda; Ji-Dong Fu; Paul Delgado-Olguin; Vasanth Vedantham; Yohei Hayashi; Benoit G Bruneau; Deepak Srivastava
Journal:  Cell       Date:  2010-08-06       Impact factor: 41.582

Review 6.  Differentiation of pluripotent embryonic stem cells into cardiomyocytes.

Authors:  Kenneth R Boheler; Jaroslaw Czyz; David Tweedie; Huang-Tian Yang; Sergey V Anisimov; Anna M Wobus
Journal:  Circ Res       Date:  2002-08-09       Impact factor: 17.367

7.  Generation of human-induced pluripotent stem cells in the absence of exogenous Sox2.

Authors:  Wenlin Li; HongYan Zhou; Ramzey Abujarour; Saiyong Zhu; Jin Young Joo; Tongxiang Lin; Ergeng Hao; Hans R Schöler; Alberto Hayek; Sheng Ding
Journal:  Stem Cells       Date:  2009-12       Impact factor: 6.277

8.  Melanocyte-like cells in the heart and pulmonary veins contribute to atrial arrhythmia triggers.

Authors:  Mark D Levin; Min Min Lu; Nataliya B Petrenko; Brian J Hawkins; Tara H Gupta; Deborah Lang; Peter T Buckley; Jeanine Jochems; Fang Liu; Christopher F Spurney; Li J Yuan; Jason T Jacobson; Christopher B Brown; Li Huang; Friedrich Beermann; Kenneth B Margulies; Muniswamy Madesh; James H Eberwine; Jonathan A Epstein; Vickas V Patel
Journal:  J Clin Invest       Date:  2009-10-12       Impact factor: 14.808

9.  Vitamin C enhances the generation of mouse and human induced pluripotent stem cells.

Authors:  Miguel Angel Esteban; Tao Wang; Baoming Qin; Jiayin Yang; Dajiang Qin; Jinglei Cai; Wen Li; Zhihui Weng; Jiekai Chen; Su Ni; Keshi Chen; Yuan Li; Xiaopeng Liu; Jianyong Xu; Shiqiang Zhang; Feng Li; Wenzhi He; Krystyna Labuda; Yancheng Song; Anja Peterbauer; Susanne Wolbank; Heinz Redl; Mei Zhong; Daozhang Cai; Lingwen Zeng; Duanqing Pei
Journal:  Cell Stem Cell       Date:  2009-12-31       Impact factor: 24.633

10.  Highly efficient reprogramming to pluripotency and directed differentiation of human cells with synthetic modified mRNA.

Authors:  Luigi Warren; Philip D Manos; Tim Ahfeldt; Yuin-Han Loh; Hu Li; Frank Lau; Wataru Ebina; Pankaj K Mandal; Zachary D Smith; Alexander Meissner; George Q Daley; Andrew S Brack; James J Collins; Chad Cowan; Thorsten M Schlaeger; Derrick J Rossi
Journal:  Cell Stem Cell       Date:  2010-09-30       Impact factor: 24.633

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  18 in total

Review 1.  Concise review: reprogramming strategies for cardiovascular regenerative medicine: from induced pluripotent stem cells to direct reprogramming.

Authors:  Inbar Budniatzky; Lior Gepstein
Journal:  Stem Cells Transl Med       Date:  2014-03-03       Impact factor: 6.940

2.  Lamin B2 Levels Regulate Polyploidization of Cardiomyocyte Nuclei and Myocardial Regeneration.

Authors:  Lu Han; Sangita Choudhury; Jocelyn D Mich-Basso; Niyatie Ammanamanchi; Balakrishnan Ganapathy; Sangita Suresh; Mugdha Khaladkar; Jennifer Singh; Rene Maehr; Daniel A Zuppo; Junhyong Kim; James H Eberwine; Samuel K Wyman; Yijen L Wu; Bernhard Kühn
Journal:  Dev Cell       Date:  2020-02-27       Impact factor: 12.270

3.  Dynamic Model for Characterizing Contractile Behaviors and Mechanical Properties of a Cardiomyocyte.

Authors:  Chuang Zhang; Wenxue Wang; Wenhui He; Ning Xi; Yuechao Wang; Lianqing Liu
Journal:  Biophys J       Date:  2018-01-09       Impact factor: 4.033

Review 4.  Induced regeneration--the progress and promise of direct reprogramming for heart repair.

Authors:  Russell C Addis; Jonathan A Epstein
Journal:  Nat Med       Date:  2013-07       Impact factor: 53.440

5.  Identifying functional gene regulatory network phenotypes underlying single cell transcriptional variability.

Authors:  James Park; Babatunde Ogunnaike; James Schwaber; Rajanikanth Vadigepalli
Journal:  Prog Biophys Mol Biol       Date:  2014-11-27       Impact factor: 3.667

Review 6.  Perspectives on cell reprogramming with RNA.

Authors:  Jai-Yoon Sul; Tae Kyung Kim; Jae Hee Lee; James Eberwine
Journal:  Trends Biotechnol       Date:  2012-03-27       Impact factor: 19.536

7.  Highly parallel genome-wide expression analysis of single mammalian cells.

Authors:  Jian-Bing Fan; Jing Chen; Craig S April; Jeffrey S Fisher; Brandy Klotzle; Marina Bibikova; Fiona Kaper; Mostafa Ronaghi; Sten Linnarsson; Takayo Ota; Jeremy Chien; Louise C Laurent; Jeanne F Loring; Sean V Nisperos; Gina Y Chen; Jiang F Zhong
Journal:  PLoS One       Date:  2012-02-08       Impact factor: 3.240

8.  Reading and writing omes.

Authors:  George M Church
Journal:  Mol Syst Biol       Date:  2013       Impact factor: 11.429

9.  Cardiac melanocytes influence atrial reactive oxygen species involved with electrical and structural remodeling in mice.

Authors:  Hayoung Hwang; Fang Liu; Nataliya B Petrenko; Jianhe Huang; Kurt J Schillinger; Vickas V Patel
Journal:  Physiol Rep       Date:  2015-09

10.  Metabolic rescue of obese adipose-derived stem cells by Lin28/Let7 pathway.

Authors:  Laura M Pérez; Aurora Bernal; Nuria San Martín; Margarita Lorenzo; Sonia Fernández-Veledo; Beatriz G Gálvez
Journal:  Diabetes       Date:  2013-02-19       Impact factor: 9.461

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