Literature DB >> 21729954

Comparison of the Abbott m2000 HIV-1 Real-Time and Roche AMPLICOR Monitor v1.5 HIV-1 assays on plasma specimens from Rakai, Uganda.

I Ssebugenyi1, A Kizza, B Mpoza, G Aluma, I Boaz, K Newell, O Laeyendecker, J P Shott, D Serwadda, S J Reynolds.   

Abstract

The need for viral load (VL) monitoring of HIV patients receiving antiretroviral therapy (ART) in resource-limited settings (RLS) has become apparent with studies showing the limitations of immunological monitoring. We compared the Abbott m2000 Real-Time (Abbott) HIV-1 assay with the Roche AMPLICOR Monitor v1.5 (Roche) HIV-1 assay over a range of VL concentrations. Three hundred and eleven plasma samples were tested, including 164 samples from patients on ART ≥ six months and 147 from ART-naïve patients. The Roche assay detected ≥400 copies/mL in 158 (50.8%) samples. Of these, Abbott produced 145 (91.8%) detectable results ≥400 copies/mL; 13 (8.2%) samples produced discrepant results. Concordance between the assays for detecting HIV-1 RNA ≥400 copies/mL was 95.8% (298/311). The sensitivity, specificity, positive predictive value and negative predictive value of Abbott to detect HIV-1 RNA ≥400 copies/mL were 91.8%, 100%, 100% and 92.2%, respectively. For the 151 samples with HIV-1 RNA ≥400 copies/mL for both assays, a good linear correlation was found (r = 0.81, P < 0.0001; mean difference, 0.05). The limits of agreement were -0.97 and 1.07 log(10) copies/mL (mean ± 2 SD). The Abbott assay performed well in our setting, offering an alternative methodology for HIV-1 VL for laboratories with realtime polymerase chain reaction (PCR) capacity.

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Year:  2011        PMID: 21729954      PMCID: PMC3725460          DOI: 10.1258/ijsa.2009.009526

Source DB:  PubMed          Journal:  Int J STD AIDS        ISSN: 0956-4624            Impact factor:   1.359


  12 in total

1.  Changes in the distribution of HIV type 1 subtypes D and A in Rakai District, Uganda between 1994 and 2002.

Authors:  Samantha A Conroy; Oliver Laeyendecker; Andrew D Redd; Aleisha Collinson-Streng; Xiangrong Kong; Fredrick Makumbi; Tom Lutalo; Nelson Sewankambo; Noah Kiwanuka; Ronald H Gray; Maria J Wawer; David Serwadda; Thomas C Quinn
Journal:  AIDS Res Hum Retroviruses       Date:  2010-10-06       Impact factor: 2.205

2.  Evaluation of the Roche Cobas TaqMan and Abbott RealTime extraction-quantification systems for HIV-1 subtypes.

Authors:  Marie Gueudin; Jean Christophe Plantier; Véronique Lemée; Marie Paule Schmitt; Loic Chartier; Thomas Bourlet; Annick Ruffault; Florence Damond; Muriel Vray; François Simon
Journal:  J Acquir Immune Defic Syndr       Date:  2007-04-15       Impact factor: 3.731

3.  Performance of the automated Abbott RealTime HIV-1 assay on a genetically diverse panel of specimens from Brazil.

Authors:  Priscilla Swanson; Shihai Huang; Vera Holzmayer; Pierre Bodelle; Julie Yamaguchi; Catherine Brennan; Roberto Badaro; Carlos Brites; Klara Abravaya; Sushil G Devare; John Hackett
Journal:  J Virol Methods       Date:  2006-02-28       Impact factor: 2.014

4.  A RealTime HIV-1 viral load assay for automated quantitation of HIV-1 RNA in genetically diverse group M subtypes A-H, group O and group N samples.

Authors:  Ning Tang; Shihai Huang; John Salituro; Wai-Bing Mak; Gavin Cloherty; Julie Johanson; Yu Hong Li; George Schneider; John Robinson; John Hackett; Priscilla Swanson; Klara Abravaya
Journal:  J Virol Methods       Date:  2007-08-17       Impact factor: 2.014

5.  Comparative performance of three viral load assays on human immunodeficiency virus type 1 (HIV-1) isolates representing group M (subtypes A to G) and group O: LCx HIV RNA quantitative, AMPLICOR HIV-1 MONITOR version 1.5, and Quantiplex HIV-1 RNA version 3.0.

Authors:  P Swanson; V Soriano; S G Devare; J Hackett
Journal:  J Clin Microbiol       Date:  2001-03       Impact factor: 5.948

6.  Performance of immunologic responses in predicting viral load suppression: implications for monitoring patients in resource-limited settings.

Authors:  David M Moore; Jonathan Mermin; Anna Awor; Benita Yip; Robert S Hogg; Julio S G Montaner
Journal:  J Acquir Immune Defic Syndr       Date:  2006-12-01       Impact factor: 3.731

7.  Sensitivity and specificity of using CD4+ measurement and clinical evaluation to determine antiretroviral treatment failure in Thailand.

Authors:  Romanee Chaiwarith; Charussri Wachirakaphan; Wilai Kotarathititum; Jutharat Praparatanaphan; Thira Sirisanthana; Khuanchai Supparatpinyo
Journal:  Int J Infect Dis       Date:  2007-02-28       Impact factor: 3.623

8.  Evaluation of the WHO criteria for antiretroviral treatment failure among adults in South Africa.

Authors:  Paul Mee; Katherine L Fielding; Salome Charalambous; Gavin J Churchyard; Alison D Grant
Journal:  AIDS       Date:  2008-10-01       Impact factor: 4.177

9.  Evaluation of the Abbott m2000 RealTime human immunodeficiency virus type 1 (HIV-1) assay for HIV load monitoring in South Africa compared to the Roche Cobas AmpliPrep-Cobas Amplicor, Roche Cobas AmpliPrep-Cobas TaqMan HIV-1, and BioMerieux NucliSENS EasyQ HIV-1 assays.

Authors:  Lesley E Scott; Lara D Noble; Jackie Moloi; Linda Erasmus; Willem D F Venter; Wendy Stevens
Journal:  J Clin Microbiol       Date:  2009-05-06       Impact factor: 5.948

10.  Failure of immunologic criteria to appropriately identify antiretroviral treatment failure in Uganda.

Authors:  Steven J Reynolds; Gertrude Nakigozi; Kevin Newell; Anthony Ndyanabo; Ronald Galiwongo; Iga Boaz; Thomas C Quinn; Ron Gray; Maria Wawer; David Serwadda
Journal:  AIDS       Date:  2009-03-27       Impact factor: 4.177

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  5 in total

1.  Cross-platform analysis of HIV-1 RNA data generated by a multicenter assay validation study with wide geographic representation.

Authors:  Cheryl Jennings; Brian Harty; Suzanne Granger; Carrie Wager; John A Crump; Susan A Fiscus; James W Bremer
Journal:  J Clin Microbiol       Date:  2012-06-12       Impact factor: 5.948

2.  Frequency of Human CD45+ Target Cells is a Key Determinant of Intravaginal HIV-1 Infection in Humanized Mice.

Authors:  Philip V Nguyen; Jocelyn M Wessels; Kristen Mueller; Fatemeh Vahedi; Varun Anipindi; Chris P Verschoor; Marianne Chew; Alexandre Deshiere; Uladzimir Karniychuk; Tony Mazzulli; Michel J Tremblay; Ali A Ashkar; Charu Kaushic
Journal:  Sci Rep       Date:  2017-11-10       Impact factor: 4.379

3.  Depot medroxyprogesterone acetate (DMPA) enhances susceptibility and increases the window of vulnerability to HIV-1 in humanized mice.

Authors:  Jocelyn M Wessels; Philip V Nguyen; Danielle Vitali; Kristen Mueller; Fatemeh Vahedi; Allison M Felker; Haley A Dupont; Puja Bagri; Chris P Verschoor; Alexandre Deshiere; Tony Mazzulli; Michel J Tremblay; Ali A Ashkar; Charu Kaushic
Journal:  Sci Rep       Date:  2021-02-16       Impact factor: 4.379

4.  Dried blood spot HIV-1 RNA quantification: a useful tool for viral load monitoring among HIV-infected individuals in India.

Authors:  Ujjwal Neogi; Soham Gupta; Rashmi Rodridges; Pravat Nalini Sahoo; Shwetha D Rao; Bharat B Rewari; Suresh Shastri; Ayesha De Costa; Anita Shet
Journal:  Indian J Med Res       Date:  2012-12       Impact factor: 2.375

Review 5.  Systematic review of the performance of HIV viral load technologies on plasma samples.

Authors:  Kimberly A Sollis; Pieter W Smit; Susan Fiscus; Nathan Ford; Marco Vitoria; Shaffiq Essajee; David Barnett; Ben Cheng; Suzanne M Crowe; Thomas Denny; Alan Landay; Wendy Stevens; Vincent Habiyambere; Jos Perrins; Rosanna W Peeling
Journal:  PLoS One       Date:  2014-02-18       Impact factor: 3.240

  5 in total

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