Literature DB >> 21728529

Self-diffusion of biomolecules in solution.

Michio Tokuyama1, Tatsuo Moriki, Yuto Kimura.   

Abstract

A simple soft-core model potential is proposed to discuss the self-diffusion of biomolecules in solution. Extensive Brownian-dynamics simulations are performed to obtain the long-time self-diffusion coefficient. Then the simulation results are compared with the experimental data from a unified point of view recently obtained for suspensions of hard spheres. Thus, it is shown that the proposed potential can qualitatively well describe the experimental data.

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Year:  2011        PMID: 21728529     DOI: 10.1103/PhysRevE.83.051402

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  7 in total

1.  A microfluidic design for desalination and selective removal and addition of components in biosamples.

Authors:  Wei Cai; Edward Wang; Ping-Wei Chen; Yi-Huan Tsai; Lennart Langouche; Yu-Hwa Lo
Journal:  Biomicrofluidics       Date:  2019-04-23       Impact factor: 2.800

2.  The shape of protein crowders is a major determinant of protein diffusion.

Authors:  Jessica Balbo; Paolo Mereghetti; Dirk-Peter Herten; Rebecca C Wade
Journal:  Biophys J       Date:  2013-04-02       Impact factor: 4.033

Review 3.  Molecular simulations of cellular processes.

Authors:  Fabio Trovato; Giordano Fumagalli
Journal:  Biophys Rev       Date:  2017-11-28

4.  Long range Debye-Hückel correction for computation of grid-based electrostatic forces between biomacromolecules.

Authors:  Paolo Mereghetti; Michael Martinez; Rebecca C Wade
Journal:  BMC Biophys       Date:  2014-06-17       Impact factor: 4.778

Review 5.  Effect of Protein-Protein Interactions on Translational Diffusion of Spheroidal Proteins.

Authors:  Aleksandra M Kusova; Aleksandr E Sitnitsky; Vladimir N Uversky; Yuriy F Zuev
Journal:  Int J Mol Sci       Date:  2022-08-17       Impact factor: 6.208

6.  Protein-protein interactions in dilute to concentrated solutions: α-chymotrypsinogen in acidic conditions.

Authors:  Marco A Blanco; Tatiana Perevozchikova; Vincenzo Martorana; Mauro Manno; Christopher J Roberts
Journal:  J Phys Chem B       Date:  2014-05-21       Impact factor: 2.991

Review 7.  How Important Is Protein Diffusion in Prokaryotes?

Authors:  Paul E Schavemaker; Arnold J Boersma; Bert Poolman
Journal:  Front Mol Biosci       Date:  2018-11-13
  7 in total

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