Literature DB >> 21727938

Virtual imaging laboratories for marker discovery in neurodegenerative diseases.

Giovanni B Frisoni1, Alberto Redolfi, David Manset, Marc-Étienne Rousseau, Arthur Toga, Alan C Evans.   

Abstract

The unprecedented growth, availability and accessibility of imaging data from people with neurodegenerative conditions has led to the development of computational infrastructures, which offer scientists access to large image databases and e-Science services such as sophisticated image analysis algorithm pipelines and powerful computational resources, as well as three-dimensional visualization and statistical tools. Scientific e-infrastructures have been and are being developed in Europe and North America that offer a suite of services for computational neuroscientists. The convergence of these initiatives represents a worldwide infrastructure that will constitute a global virtual imaging laboratory. This will provide computational neuroscientists with a virtual space that is accessible through an ordinary web browser, where image data sets and related clinical variables, algorithm pipelines, computational resources, and statistical and visualization tools will be transparently accessible to users irrespective of their physical location. Such an experimental environment will be instrumental to the success of ambitious scientific initiatives with high societal impact, such as the prevention of Alzheimer disease. In this article, we provide an overview of the currently available e-infrastructures and consider how computational neuroscience in neurodegenerative disease might evolve in the future.

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Year:  2011        PMID: 21727938     DOI: 10.1038/nrneurol.2011.99

Source DB:  PubMed          Journal:  Nat Rev Neurol        ISSN: 1759-4758            Impact factor:   42.937


  19 in total

1.  Automated 3-D extraction and evaluation of the inner and outer cortical surfaces using a Laplacian map and partial volume effect classification.

Authors:  June Sic Kim; Vivek Singh; Jun Ki Lee; Jason Lerch; Yasser Ad-Dab'bagh; David MacDonald; Jong Min Lee; Sun I Kim; Alan C Evans
Journal:  Neuroimage       Date:  2005-08-01       Impact factor: 6.556

2.  Validation of a fully automated 3D hippocampal segmentation method using subjects with Alzheimer's disease mild cognitive impairment, and elderly controls.

Authors:  Jonathan H Morra; Zhuowen Tu; Liana G Apostolova; Amity E Green; Christina Avedissian; Sarah K Madsen; Neelroop Parikshak; Xue Hua; Arthur W Toga; Clifford R Jack; Michael W Weiner; Paul M Thompson
Journal:  Neuroimage       Date:  2008-07-16       Impact factor: 6.556

3.  Longitudinal changes in fiber tract integrity in healthy aging and mild cognitive impairment: a DTI follow-up study.

Authors:  Stefan J Teipel; Thomas Meindl; Maximilian Wagner; Bram Stieltjes; Sigrid Reuter; Karl-Heinz Hauenstein; Massimo Filippi; Ulrike Ernemann; Maximilian F Reiser; Harald Hampel
Journal:  J Alzheimers Dis       Date:  2010       Impact factor: 4.472

4.  Different regional patterns of cortical thinning in Alzheimer's disease and frontotemporal dementia.

Authors:  An-Tao Du; Norbert Schuff; Joel H Kramer; Howard J Rosen; Maria Luisa Gorno-Tempini; Katherine Rankin; Bruce L Miller; Michael W Weiner
Journal:  Brain       Date:  2007-03-12       Impact factor: 13.501

5.  Prediction of individual brain maturity using fMRI.

Authors:  Nico U F Dosenbach; Binyam Nardos; Alexander L Cohen; Damien A Fair; Jonathan D Power; Jessica A Church; Steven M Nelson; Gagan S Wig; Alecia C Vogel; Christina N Lessov-Schlaggar; Kelly Anne Barnes; Joseph W Dubis; Eric Feczko; Rebecca S Coalson; John R Pruett; Deanna M Barch; Steven E Petersen; Bradley L Schlaggar
Journal:  Science       Date:  2010-09-10       Impact factor: 47.728

6.  Baseline MRI predictors of conversion from MCI to probable AD in the ADNI cohort.

Authors:  Shannon L Risacher; Andrew J Saykin; John D West; Li Shen; Hiram A Firpi; Brenna C McDonald
Journal:  Curr Alzheimer Res       Date:  2009-08       Impact factor: 3.498

7.  A multicenter (1)H-MRS study of the medial temporal lobe in AD and MCI.

Authors:  F Jessen; O Gür; W Block; G Ende; L Frölich; T Hammen; J Wiltfang; T Kucinski; H Jahn; R Heun; W Maier; H Kölsch; J Kornhuber; F Träber
Journal:  Neurology       Date:  2009-05-19       Impact factor: 9.910

8.  Can structural MRI indices of cerebral integrity track cognitive trends in executive control function during normal maturation and adulthood?

Authors:  Peter Kochunov; Don A Robin; Don R Royall; Thomas Coyle; Jack Lancaster; Valeria Kochunov; Anita E Schlosser; Peter T Fox
Journal:  Hum Brain Mapp       Date:  2009-08       Impact factor: 5.038

9.  Neuroimaging study designs, computational analyses and data provenance using the LONI pipeline.

Authors:  Ivo Dinov; Kamen Lozev; Petros Petrosyan; Zhizhong Liu; Paul Eggert; Jonathan Pierce; Alen Zamanyan; Shruthi Chakrapani; John Van Horn; D Stott Parker; Rico Magsipoc; Kelvin Leung; Boris Gutman; Roger Woods; Arthur Toga
Journal:  PLoS One       Date:  2010-09-28       Impact factor: 3.240

10.  Accuracy of dementia diagnosis: a direct comparison between radiologists and a computerized method.

Authors:  Stefan Klöppel; Cynthia M Stonnington; Josephine Barnes; Frederick Chen; Carlton Chu; Catriona D Good; Irina Mader; L Anne Mitchell; Ameet C Patel; Catherine C Roberts; Nick C Fox; Clifford R Jack; John Ashburner; Richard S J Frackowiak
Journal:  Brain       Date:  2008-10-03       Impact factor: 13.501

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  24 in total

Review 1.  The clinical value of large neuroimaging data sets in Alzheimer's disease.

Authors:  Arthur W Toga
Journal:  Neuroimaging Clin N Am       Date:  2011-12-17       Impact factor: 2.264

2.  Heritable changes in regional cortical thickness with age.

Authors:  Francois Chouinard-Decorte; D Reese McKay; Andrew Reid; Budhachandra Khundrakpam; Lu Zhao; Sherif Karama; Pierre Rioux; Emma Sprooten; Emma Knowles; Jack W Kent; Joanne E Curran; Harald H H Göring; Thomas D Dyer; Rene L Olvera; Peter Kochunov; Ravi Duggirala; Peter T Fox; Laura Almasy; John Blangero; Pierre Bellec; Alan C Evans; David C Glahn
Journal:  Brain Imaging Behav       Date:  2014-04-22       Impact factor: 3.978

3.  Emerging subspecialties: neuroinformatics.

Authors:  Yousef Hannawi; Stelios M Smirnakis
Journal:  Neurology       Date:  2013-04-09       Impact factor: 9.910

Review 4.  CATI: A Large Distributed Infrastructure for the Neuroimaging of Cohorts.

Authors:  Grégory Operto; Marie Chupin; Bénédicte Batrancourt; Marie-Odile Habert; Olivier Colliot; Habib Benali; Cyril Poupon; Catherine Champseix; Christine Delmaire; Sullivan Marie; Denis Rivière; Mélanie Pélégrini-Issac; Vincent Perlbarg; Régine Trebossen; Michel Bottlaender; Vincent Frouin; Antoine Grigis; Dimitri Papadopoulos Orfanos; Hugo Dary; Ludovic Fillon; Chabha Azouani; Ali Bouyahia; Clara Fischer; Lydie Edward; Mathilde Bouin; Urielle Thoprakarn; Jinpeng Li; Leila Makkaoui; Sylvain Poret; Carole Dufouil; Vincent Bouteloup; Gaël Chételat; Bruno Dubois; Stéphane Lehéricy; Jean-François Mangin; Yann Cointepas
Journal:  Neuroinformatics       Date:  2016-07

5.  Science in the cloud (SIC): A use case in MRI connectomics.

Authors:  Gregory Kiar; Krzysztof J Gorgolewski; Dean Kleissas; William Gray Roncal; Brian Litt; Brian Wandell; Russel A Poldrack; Martin Wiener; R Jacob Vogelstein; Randal Burns; Joshua T Vogelstein
Journal:  Gigascience       Date:  2017-05-01       Impact factor: 6.524

Review 6.  Imaging markers for Alzheimer disease: which vs how.

Authors:  Giovanni B Frisoni; Martina Bocchetta; Gael Chételat; Gil D Rabinovici; Mony J de Leon; Jeffrey Kaye; Eric M Reiman; Philip Scheltens; Frederik Barkhof; Sandra E Black; David J Brooks; Maria C Carrillo; Nick C Fox; Karl Herholz; Agneta Nordberg; Clifford R Jack; William J Jagust; Keith A Johnson; Christopher C Rowe; Reisa A Sperling; William Thies; Lars-Olof Wahlund; Michael W Weiner; Patrizio Pasqualetti; Charles Decarli
Journal:  Neurology       Date:  2013-07-30       Impact factor: 9.910

7.  Early experiences in developing and managing the neuroscience gateway.

Authors:  Subhashini Sivagnanam; Amit Majumdar; Kenneth Yoshimoto; Vadim Astakhov; Anita Bandrowski; MaryAnn Martone; Nicholas T Carnevale
Journal:  Concurr Comput       Date:  2015-02-01       Impact factor: 1.536

8.  The A/T/N model applied through imaging biomarkers in a memory clinic.

Authors:  Alessandra Dodich; Aline Mendes; Frédéric Assal; Christian Chicherio; Barinjaka Rakotomiaramanana; Paulina Andryszak; Cristina Festari; Federica Ribaldi; Max Scheffler; Roger Schibli; Adam J Schwarz; Dina Zekry; Karl-Olof Lövblad; Marina Boccardi; Paul G Unschuld; Gabriel Gold; Giovanni B Frisoni; Valentina Garibotto
Journal:  Eur J Nucl Med Mol Imaging       Date:  2019-12-02       Impact factor: 9.236

Review 9.  Brain investigation and brain conceptualization.

Authors:  Alberto Redolfi; Paolo Bosco; David Manset; Giovanni B Frisoni
Journal:  Funct Neurol       Date:  2013 Jul-Sep

Review 10.  Brain SPECT as a Biomarker of Neurodegeneration in Dementia in the Era of Molecular Imaging: Still a Valid Option?

Authors:  Rodolfo Ferrando; Andres Damian
Journal:  Front Neurol       Date:  2021-05-10       Impact factor: 4.003

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