Literature DB >> 21725885

Important role of hydrophobic interactions in high-pressure adaptation of proteins.

D A Afonnikov1, K E Medvedev, K V Gunbin, N A Kolchanov.   

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Year:  2011        PMID： 21725885     DOI： 10.1134/S160767291103001X

Source DB:  PubMed          Journal:  Dokl Biochem Biophys        ISSN： 1607-6729            Impact factor:   0.788


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  13 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

2.  Some factors in the interpretation of protein denaturation.

Authors:  W KAUZMANN
Journal:  Adv Protein Chem       Date:  1959

3.  The ocean abysses witnessed the origin of the genetic code.

Authors:  Massimo Di Giulio
Journal:  Gene       Date:  2004-12-31       Impact factor: 3.688

Review 4.  Origins of life and biochemistry under high-pressure conditions.

Authors:  Isabelle Daniel; Philippe Oger; Roland Winter
Journal:  Chem Soc Rev       Date:  2006-08-29       Impact factor: 54.564

5.  Homology modeling, model and software evaluation: three related resources.

Authors:  R Rodriguez; G Chinea; N Lopez; T Pons; G Vriend
Journal:  Bioinformatics       Date:  1998       Impact factor: 6.937

6.  The pressure dependence of hydrophobic interactions is consistent with the observed pressure denaturation of proteins.

Authors:  G Hummer; S Garde; A E García; M E Paulaitis; L R Pratt
Journal:  Proc Natl Acad Sci U S A       Date:  1998-02-17       Impact factor: 11.205

7.  Analysis of amino acid indices and mutation matrices for sequence comparison and structure prediction of proteins.

Authors:  K Tomii; M Kanehisa
Journal:  Protein Eng       Date:  1996-01

8.  Structural insights into the interaction of the Nip7 PUA domain with polyuridine RNA.

Authors:  Patrícia P Coltri; Beatriz G Guimarães; Daniela C Granato; Juliana S Luz; Elaine C Teixeira; Carla C Oliveira; Nilson I T Zanchin
Journal:  Biochemistry       Date:  2007-11-15       Impact factor: 3.162

9.  AAindex: amino acid index database, progress report 2008.

Authors:  Shuichi Kawashima; Piotr Pokarowski; Maria Pokarowska; Andrzej Kolinski; Toshiaki Katayama; Minoru Kanehisa
Journal:  Nucleic Acids Res       Date:  2007-11-12       Impact factor: 16.971

10.  Molecular evolution of the hyperthermophilic archaea of the Pyrococcus genus: analysis of adaptation to different environmental conditions.

Authors:  Konstantin V Gunbin; Dmitry A Afonnikov; Nikolay A Kolchanov
Journal:  BMC Genomics       Date:  2009-12-30       Impact factor: 3.969
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  2 in total

1.  Evolution of general transcription factors.

Authors:  K V Gunbin; A Ruvinsky
Journal:  J Mol Evol       Date:  2012-12-11       Impact factor: 2.395

2.  Molecular dynamics simulations of the Nip7 proteins from the marine deep- and shallow-water Pyrococcus species.

Authors:  Kirill E Medvedev; Nikolay A Alemasov; Yuri N Vorobjev; Elena V Boldyreva; Nikolay A Kolchanov; Dmitry A Afonnikov
Journal:  BMC Struct Biol       Date:  2014-10-15
  2 in total

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