Literature DB >> 21724890

Soil microbial community successional patterns during forest ecosystem restoration.

Natasha C Banning1, Deirdre B Gleeson, Andrew H Grigg, Carl D Grant, Gary L Andersen, Eoin L Brodie, D V Murphy.   

Abstract

Soil microbial community characterization is increasingly being used to determine the responses of soils to stress and disturbances and to assess ecosystem sustainability. However, there is little experimental evidence to indicate that predictable patterns in microbial community structure or composition occur during secondary succession or ecosystem restoration. This study utilized a chronosequence of developing jarrah (Eucalyptus marginata) forest ecosystems, rehabilitated after bauxite mining (up to 18 years old), to examine changes in soil bacterial and fungal community structures (by automated ribosomal intergenic spacer analysis [ARISA]) and changes in specific soil bacterial phyla by 16S rRNA gene microarray analysis. This study demonstrated that mining in these ecosystems significantly altered soil bacterial and fungal community structures. The hypothesis that the soil microbial community structures would become more similar to those of the surrounding nonmined forest with rehabilitation age was broadly supported by shifts in the bacterial but not the fungal community. Microarray analysis enabled the identification of clear successional trends in the bacterial community at the phylum level and supported the finding of an increase in similarity to nonmined forest soil with rehabilitation age. Changes in soil microbial community structure were significantly related to the size of the microbial biomass as well as numerous edaphic variables (including pH and C, N, and P nutrient concentrations). These findings suggest that soil bacterial community dynamics follow a pattern in developing ecosystems that may be predictable and can be conceptualized as providing an integrated assessment of numerous edaphic variables.

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Year:  2011        PMID: 21724890      PMCID: PMC3165429          DOI: 10.1128/AEM.00764-11

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  32 in total

1.  Characterization of bacterial and fungal soil communities by automated ribosomal intergenic spacer analysis fingerprints: biological and methodological variability.

Authors:  L Ranjard; F Poly; J C Lata; C Mougel; J Thioulouse; S Nazaret
Journal:  Appl Environ Microbiol       Date:  2001-10       Impact factor: 4.792

2.  Response of a soil bacterial community to grassland succession as monitored by 16S rRNA levels of the predominant ribotypes.

Authors:  A Felske; A Wolterink; R Van Lis; W M De Vos; A D Akkermans
Journal:  Appl Environ Microbiol       Date:  2000-09       Impact factor: 4.792

Review 3.  Microbial diversity and function in soil: from genes to ecosystems.

Authors:  Vigdis Torsvik; Lise Øvreås
Journal:  Curr Opin Microbiol       Date:  2002-06       Impact factor: 7.934

4.  Does disturbance and restoration of alpine grassland soils affect the genetic structure and diversity of bacterial and N2-fixing populations?

Authors:  Raphaël Gros; Lucile Jocteur Monrozier; Pierre Faivre
Journal:  Environ Microbiol       Date:  2006-11       Impact factor: 5.491

5.  Structural diversity of bacterial communities in a heavy metal mineralized granite outcrop.

Authors:  Deirdre Gleeson; Frank McDermott; Nicholas Clipson
Journal:  Environ Microbiol       Date:  2006-03       Impact factor: 5.491

6.  Selective progressive response of soil microbial community to wild oat roots.

Authors:  Kristen M DeAngelis; Eoin L Brodie; Todd Z DeSantis; Gary L Andersen; Steven E Lindow; Mary K Firestone
Journal:  ISME J       Date:  2008-11-13       Impact factor: 10.302

7.  Spatial patterns of bacterial taxa in nature reflect ecological traits of deep branches of the 16S rRNA bacterial tree.

Authors:  Laurent Philippot; David Bru; Nicolas P A Saby; Jirí Cuhel; Dominique Arrouays; Miloslav Simek; Sara Hallin
Journal:  Environ Microbiol       Date:  2009-07-23       Impact factor: 5.491

8.  Vegetation and soil environment influence the spatial distribution of root-associated fungi in a mature beech-maple forest.

Authors:  David J Burke; Juan C López-Gutiérrez; Kurt A Smemo; Charlotte R Chan
Journal:  Appl Environ Microbiol       Date:  2009-10-23       Impact factor: 4.792

9.  ribosort: a program for automated data preparation and exploratory analysis of microbial community fingerprints.

Authors:  U Scallan; A Liliensiek; N Clipson; J Connolly
Journal:  Mol Ecol Resour       Date:  2008-01       Impact factor: 7.090

10.  Comparison of diversities and compositions of bacterial populations inhabiting natural forest soils.

Authors:  Evelyn Hackl; Sophie Zechmeister-Boltenstern; Levente Bodrossy; Angela Sessitsch
Journal:  Appl Environ Microbiol       Date:  2004-09       Impact factor: 4.792

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  32 in total

1.  Microbial and geochemical assessment of bauxitic un-mined and post-mined chronosequence soils from Mocho Mountains, Jamaica.

Authors:  Dawn E Lewis; Ashvini Chauhan; John R White; Will Overholt; Stefan J Green; Puja Jasrotia; Denis Wafula; Charles Jagoe
Journal:  Microb Ecol       Date:  2012-03-04       Impact factor: 4.552

2.  Impacts of Long-Term Irrigation of Domestic Treated Wastewater on Soil Biogeochemistry and Bacterial Community Structure.

Authors:  Denis Wafula; John R White; Andy Canion; Charles Jagoe; Ashish Pathak; Ashvini Chauhan
Journal:  Appl Environ Microbiol       Date:  2015-08-07       Impact factor: 4.792

3.  Culture-independent metagenomic approach to characterize the surface and subsurface soil bacterial community in the Brahmaputra valley, Assam, North-East India, an Indo-Burma mega-biodiversity hotspot.

Authors:  P N Bhattacharyya; B Tanti; P Barman; D K Jha
Journal:  World J Microbiol Biotechnol       Date:  2013-08-30       Impact factor: 3.312

4.  An assessment of microbial communities associated with surface mining-disturbed overburden.

Authors:  Dominique M Poncelet; Nicole Cavender; Teresa J Cutright; John M Senko
Journal:  Environ Monit Assess       Date:  2013-11-06       Impact factor: 2.513

5.  Determinants of Soil Bacterial and Fungal Community Composition Toward Carbon-Use Efficiency Across Primary and Secondary Forests in a Costa Rican Conservation Area.

Authors:  Katie M McGee; William D Eaton; Shadi Shokralla; Mehrdad Hajibabaei
Journal:  Microb Ecol       Date:  2018-06-01       Impact factor: 4.552

6.  Soil Bacterial and Fungal Communities Show Distinct Recovery Patterns during Forest Ecosystem Restoration.

Authors:  Shan Sun; Song Li; Bethany N Avera; Brian D Strahm; Brian D Badgley
Journal:  Appl Environ Microbiol       Date:  2017-06-30       Impact factor: 4.792

7.  Changes in Larval Mosquito Microbiota Reveal Non-target Effects of Insecticide Treatments in Hurricane-Created Habitats.

Authors:  Joseph P Receveur; Jennifer L Pechal; M Eric Benbow; Gary Donato; Tadhgh Rainey; John R Wallace
Journal:  Microb Ecol       Date:  2018-03-17       Impact factor: 4.552

8.  Insight of soil amelioration process of bauxite residues amended with organic materials from different sources.

Authors:  Yuanpeng Dong; Yifei Shao; Aiju Liu; Xijuan Liu; Mi Wu; Xinxin Hu; Qian Zhang; Zilin Meng
Journal:  Environ Sci Pollut Res Int       Date:  2019-08-09       Impact factor: 4.223

9.  Bacterial Community Features Are Shaped by Geographic Location, Physicochemical Properties, and Oil Contamination of Soil in Main Oil Fields of China.

Authors:  Jingqiu Liao; Jie Wang; Yi Huang
Journal:  Microb Ecol       Date:  2015-02-13       Impact factor: 4.552

Review 10.  Characterizing microbial communities through space and time.

Authors:  Antonio Gonzalez; Andrew King; Michael S Robeson; Sejin Song; Ashley Shade; Jessica L Metcalf; Rob Knight
Journal:  Curr Opin Biotechnol       Date:  2011-12-07       Impact factor: 9.740

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