Literature DB >> 21723733

Human HDAC isoform selectivity achieved via exploitation of the acetate release channel with structurally unique small molecule inhibitors.

Lewis Whitehead1, Markus R Dobler, Branko Radetich, Yanyi Zhu, Peter W Atadja, Tavina Claiborne, Jonathan E Grob, Andrew McRiner, Margaret R Pancost, Anup Patnaik, Wenlin Shao, Michael Shultz, Ritesh Tichkule, Ruben A Tommasi, Brian Vash, Ping Wang, Travis Stams.   

Abstract

Herein we report the discovery of a family of novel yet simple, amino-acid derived class I HDAC inhibitors that demonstrate isoform selectivity via access to the internal acetate release channel. Isoform selectivity criteria is discussed on the basis of X-ray crystallography and molecular modeling of these novel inhibitors bound to HDAC8, potentially revealing insights into the mechanism of enzymatic function through novel structural features revealed at the atomic level.
Copyright © 2011 Elsevier Ltd. All rights reserved.

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Year:  2011        PMID: 21723733     DOI: 10.1016/j.bmc.2011.06.030

Source DB:  PubMed          Journal:  Bioorg Med Chem        ISSN: 0968-0896            Impact factor:   3.641


  29 in total

1.  Histone deacetylase (HDAC) inhibitor kinetic rate constants correlate with cellular histone acetylation but not transcription and cell viability.

Authors:  Benjamin E L Lauffer; Robert Mintzer; Rina Fong; Susmith Mukund; Christine Tam; Inna Zilberleyb; Birgit Flicke; Allegra Ritscher; Grazyna Fedorowicz; Roxanne Vallero; Daniel F Ortwine; Janet Gunzner; Zora Modrusan; Lars Neumann; Christopher M Koth; Patrick J Lupardus; Joshua S Kaminker; Christopher E Heise; Pascal Steiner
Journal:  J Biol Chem       Date:  2013-07-29       Impact factor: 5.157

Review 2.  Targeting Metalloenzymes for Therapeutic Intervention.

Authors:  Allie Y Chen; Rebecca N Adamek; Benjamin L Dick; Cy V Credille; Christine N Morrison; Seth M Cohen
Journal:  Chem Rev       Date:  2018-09-07       Impact factor: 60.622

3.  Discovery of novel N-substituted thiazolidinediones (TZDs) as HDAC8 inhibitors: in-silico studies, synthesis, and biological evaluation.

Authors:  Neha Upadhyay; Kalpana Tilekar; Niklas Jänsch; Markus Schweipert; Jessica D Hess; Luca Henze Macias; Piotr Mrowka; Renato J Aguilera; Jun-Yong Choe; Franz-Josef Meyer-Almes; C S Ramaa
Journal:  Bioorg Chem       Date:  2020-05-15       Impact factor: 5.275

4.  HDAC8 substrate selectivity is determined by long- and short-range interactions leading to enhanced reactivity for full-length histone substrates compared with peptides.

Authors:  Carol Ann Castañeda; Noah A Wolfson; Katherine R Leng; Yin-Ming Kuo; Andrew J Andrews; Carol A Fierke
Journal:  J Biol Chem       Date:  2017-11-06       Impact factor: 5.157

5.  Preparation of a new construct of human histone deacetylase 8 for the crystallization of enzyme-inhibitor complexes.

Authors:  Nicholas J Porter; David W Christianson
Journal:  Methods Enzymol       Date:  2019-07-18       Impact factor: 1.600

6.  Phosphorylation of Histone Deacetylase 8: Structural and Mechanistic Analysis of the Phosphomimetic S39E Mutant.

Authors:  Katherine R Welker Leng; Carol Ann Castañeda; Christophe Decroos; Barira Islam; Shozeb M Haider; David W Christianson; Carol A Fierke
Journal:  Biochemistry       Date:  2019-11-04       Impact factor: 3.162

Review 7.  Structure, mechanism, and inhibition of histone deacetylases and related metalloenzymes.

Authors:  Patrick M Lombardi; Kathryn E Cole; Daniel P Dowling; David W Christianson
Journal:  Curr Opin Struct Biol       Date:  2011-08-25       Impact factor: 6.809

Review 8.  Targeted cancer therapy: giving histone deacetylase inhibitors all they need to succeed.

Authors:  Berkley E Gryder; Quaovi H Sodji; Adegboyega K Oyelere
Journal:  Future Med Chem       Date:  2012-03       Impact factor: 3.808

Review 9.  Small molecule inhibitors of zinc-dependent histone deacetylases.

Authors:  Florence F Wagner; Michel Weїwer; Michael C Lewis; Edward B Holson
Journal:  Neurotherapeutics       Date:  2013-10       Impact factor: 7.620

10.  Synthesis and biological evaluation of largazole analogues with modified surface recognition cap groups.

Authors:  Pravin Bhansali; Christin L Hanigan; Lalith Perera; Robert A Casero; L M Viranga Tillekeratne
Journal:  Eur J Med Chem       Date:  2014-09-06       Impact factor: 6.514

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