Literature DB >> 21713409

Differential expression of microRNA patterns in planarian normal and regenerative tissues.

Qing-Nan Tian1, Zhen-Xia Bao, Ping Lu, Yun-Fei Qin, San-Jun Chen, Feng Liang, Jia Mai, Jin-Mei Zhao, Zhao-Yu Zhu, Yi-Zhe Zhang, Shou-Tao Zhang.   

Abstract

MicroRNAs (miRNAs) are ~22-nt small non-coding RNAs that regulate the expression of specific target genes in many eukaryotes. miRNAs have been shown to play important roles in stem cell maintenance, cell fate determination, and differentiation. Planarians are capable of regenerating entire body plans from tiny fragments; this regenerative capacity is facilitated by a population of pluripotent stem cells known as neoblasts. Planarians have been a classic model system for the study of many aspects of stem cell biology. However, very limited knowledge on miRNA involved in this regulatory mechanism exists. This study profiles the expression of miRNAs in the normal and regenerative tissues of planarians using miRCURY LNA array technology. Thirteen miRNAs showed significant differences in expression between these two tissues. To further confirm our results, we examined the expression of two miRNAs by qRT-PCR. Results show that some known miRNAs may play key roles in the regulatory mechanisms of regeneration. Our findings can be utilized in future research on miRNA function.

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Year:  2011        PMID: 21713409     DOI: 10.1007/s11033-011-1018-5

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  17 in total

1.  Embryonic stem cell-specific MicroRNAs.

Authors:  Hristo B Houbaviy; Michael F Murray; Phillip A Sharp
Journal:  Dev Cell       Date:  2003-08       Impact factor: 12.270

2.  The 21-nucleotide let-7 RNA regulates developmental timing in Caenorhabditis elegans.

Authors:  B J Reinhart; F J Slack; M Basson; A E Pasquinelli; J C Bettinger; A E Rougvie; H R Horvitz; G Ruvkun
Journal:  Nature       Date:  2000-02-24       Impact factor: 49.962

Review 3.  Wnt signaling in disease and in development.

Authors:  Roel Nusse
Journal:  Cell Res       Date:  2005-01       Impact factor: 25.617

Review 4.  Illuminating the silence: understanding the structure and function of small RNAs.

Authors:  Tariq M Rana
Journal:  Nat Rev Mol Cell Biol       Date:  2007-01       Impact factor: 94.444

Review 5.  Mechanisms of post-transcriptional regulation by microRNAs: are the answers in sight?

Authors:  Witold Filipowicz; Suvendra N Bhattacharyya; Nahum Sonenberg
Journal:  Nat Rev Genet       Date:  2008-02       Impact factor: 53.242

6.  High-resolution profiling and discovery of planarian small RNAs.

Authors:  Marc R Friedländer; Catherine Adamidi; Ting Han; Svetlana Lebedeva; Thomas A Isenbarger; Martin Hirst; Marco Marra; Chad Nusbaum; William L Lee; James C Jenkin; Alejandro Sánchez Alvarado; John K Kim; Nikolaus Rajewsky
Journal:  Proc Natl Acad Sci U S A       Date:  2009-06-29       Impact factor: 11.205

7.  The microRNA miR-8 is a conserved negative regulator of Wnt signaling.

Authors:  Jennifer A Kennell; Isabelle Gerin; Ormond A MacDougald; Ken M Cadigan
Journal:  Proc Natl Acad Sci U S A       Date:  2008-09-29       Impact factor: 11.205

Review 8.  The let-7 family of microRNAs.

Authors:  Sarah Roush; Frank J Slack
Journal:  Trends Cell Biol       Date:  2008-09-04       Impact factor: 20.808

9.  Deep sequencing identifies new and regulated microRNAs in Schmidtea mediterranea.

Authors:  Yi-Chien Lu; Magda Smielewska; Dasaradhi Palakodeti; Michael T Lovci; Stefan Aigner; Gene W Yeo; Brenton R Graveley
Journal:  RNA       Date:  2009-06-24       Impact factor: 4.942

10.  SmedGD: the Schmidtea mediterranea genome database.

Authors:  Sofia M C Robb; Eric Ross; Alejandro Sánchez Alvarado
Journal:  Nucleic Acids Res       Date:  2007-09-18       Impact factor: 16.971

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  3 in total

1.  miRNAs expression profile in bast of ramie elongation phase and cell wall thickening and end wall dissolving phase.

Authors:  Jun Wang; Jing-Shu Huang; Xin-Yan Hao; Yan-Ping Feng; Ya-Jun Cai; Li-Qin Sun
Journal:  Mol Biol Rep       Date:  2014-01-03       Impact factor: 2.316

2.  Djnedd4L Is Required for Head Regeneration by Regulating Stem Cell Maintenance in Planarians.

Authors:  Qingnan Tian; Yujia Sun; Tingting Gao; Jiaxin Li; Huimin Fang; Shoutao Zhang
Journal:  Int J Mol Sci       Date:  2021-10-28       Impact factor: 5.923

3.  Identification of neoblast- and regeneration-specific miRNAs in the planarian Schmidtea mediterranea.

Authors:  Vidyanand Sasidharan; Yi-Chien Lu; Dhiru Bansal; Pranavi Dasari; Deepak Poduval; Aswin Seshasayee; Alissa M Resch; Brenton R Graveley; Dasaradhi Palakodeti
Journal:  RNA       Date:  2013-08-23       Impact factor: 4.942

  3 in total

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