Literature DB >> 21712058

Common and well-documented (CWD) alleles of human leukocyte antigen-A, -B, -C, -DRB1, and -DQB1 loci for the Chinese Han population do not quite correlate with the ASHI CWD alleles.

Jun He1, Yang Li, Xiaojing Bao, Qiaocheng Qiu, Xiaoni Yuan, Chao Xu, Jiehong Shen, Jianquan Hou.   

Abstract

Human leukocyte antigen (HLA), which is extremely polymorphic, plays an important role in stem cell transplantation. The Chinese Han comprise a large population of approximately 1.3 billion with diverse HLA alleles that need to be characterized. Data from 3,296 independent, unrelated Chinese Han individuals (1,457 recipients and 1,839 donors) were provided by the China Marrow Donor Program (CMDP) for donor-recipient confirmatory typing. Sequence-based typing, sequence-specific oligonucleotide probe (SSOP)/High Definition-SSOP, and sequence-specific primer methods were used to obtain 4-digit alleles. A total of 49, 86, 50, 63, and 24 HLA-A, -B, -C, -DRB1, and -DQB1 alleles were observed. Following American Society for Histocompatibility and Immunogenetics (ASHI) common and well-documented (CWD) criteria, CWD alleles for Chinese Han in our laboratory test and other laboratory reports do not quite correlate with the ASHI CWD alleles: A*11:53, A*02:34, A*02:53N, B*27:24, B*46:02, B*55:12, C*01:06, C*03:17, C*06:06, C*07:66, C*07:67, C*08:22, DRB1*12:10, DQB1*03:13, and DQB1*06:05 are CWD, but are not included in the ASHI CWD list. A series of alleles are well-documented alleles and are listed in the ASHI CWD list. Conversely, A*26:03, B*51:03, C*12:05, C*15:09, C*15:11, C*17:03, DRB1*11:07, DRB1*11:11, DRB1*13:05, DRB1*13:13, DRB1*14:06, DRB1*14:12, DRB1*14:22, DRB1*14:25, and DQB1*06:11 are rare alleles, but are included in the ASHI CWD list. HLA ethnic diversity is the main reason for the differences in HLA alleles worldwide. The ASHI HLA CWD alleles help reduce the workload and expenses in high-resolution donor registries and the HLA allele frequencies provide a basis from which to predict the chances of finding HLA matching donors. Our data will be meaningful for the CMDP, for other worldwide donor registries, and for an updated ASHI CWD allele list.
Copyright © 2012 American Society for Histocompatibility and Immunogenetics. Published by Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21712058     DOI: 10.1016/j.humimm.2011.06.005

Source DB:  PubMed          Journal:  Hum Immunol        ISSN: 0198-8859            Impact factor:   2.850


  4 in total

1.  Common and well-documented HLA alleles: 2012 update to the CWD catalogue.

Authors:  S J Mack; P Cano; J A Hollenbach; J He; C K Hurley; D Middleton; M E Moraes; S E Pereira; J H Kempenich; E F Reed; M Setterholm; A G Smith; M G Tilanus; M Torres; M D Varney; C E M Voorter; G F Fischer; K Fleischhauer; D Goodridge; W Klitz; A-M Little; M Maiers; S G E Marsh; C R Müller; H Noreen; E H Rozemuller; A Sanchez-Mazas; D Senitzer; E Trachtenberg; Marcelo Fernandez-Vina
Journal:  Tissue Antigens       Date:  2013-04

2.  High-Resolution Analyses of Human Leukocyte Antigens Allele and Haplotype Frequencies Based on 169,995 Volunteers from the China Bone Marrow Donor Registry Program.

Authors:  Xiao-Yang Zhou; Fa-Ming Zhu; Jian-Ping Li; Wei Mao; De-Mei Zhang; Meng-Li Liu; Ai-Lian Hei; Da-Peng Dai; Ping Jiang; Xiao-Yan Shan; Bo-Wei Zhang; Chuan-Fu Zhu; Jie Shen; Zhi-Hui Deng; Zheng-Lei Wang; Wei-Jian Yu; Qiang Chen; Yan-Hui Qiao; Xiang-Ming Zhu; Rong Lv; Guo-Ying Li; Guo-Liang Li; Heng-Cong Li; Xu Zhang; Bin Pei; Li-Xin Jiao; Gang Shen; Ying Liu; Zhi-Hui Feng; Yu-Ping Su; Zhao-Xia Xu; Wen-Ying Di; Yao-Qin Jiang; Hong-Lei Fu; Xiang-Jun Liu; Xiang Liu; Mei-Zhen Zhou; Dan Du; Qi Liu; Ying Han; Zhi-Xin Zhang; Jian-Ping Cai
Journal:  PLoS One       Date:  2015-09-30       Impact factor: 3.240

Review 3.  The relevance of HLA sequencing in population genetics studies.

Authors:  Alicia Sanchez-Mazas; Diogo Meyer
Journal:  J Immunol Res       Date:  2014-07-15       Impact factor: 4.818

4.  Common and well-documented HLA alleles of German stem cell donors by haplotype frequency estimation.

Authors:  Hans-Peter Eberhard; Alexander H Schmidt; Joannis Mytilineos; Katharina Fleischhauer; Carlheinz R Müller
Journal:  HLA       Date:  2018-10       Impact factor: 4.513

  4 in total

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