Literature DB >> 21708569

Conservation of microsatellites among tropical trees (Leguminosae).

S Dayanandan, K Bawa, R Kesseli.   

Abstract

Although microsatellites or simple sequence repeats (SSRs) have become a popular tool in genetic mapping and gene flow studies, their utility is limited due to paucity of information about DNA sequences in plants. We tested the utility of microsatellite markers characterized for the tropical tree Pithecellobium elegans as a genetic tool for related species. The results indicate that SSR loci are conserved among closely related species, and SSR primers developed for P. elegans could be successfully used as a genetic tool in several species of the tribe Ingeae. This study indicates that there is high potential for the transfer of SSR markers among closely related taxa, circumventing laborious cloning and screening procedures involved in characterizing SSR loci for many species.

Entities:  

Year:  1997        PMID: 21708569

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  14 in total

1.  Tall fescue genomic SSR markers: development and transferability across multiple grass species.

Authors:  Malay C Saha; John D Cooper; M A Rouf Mian; Konstantin Chekhovskiy; Gregory D May
Journal:  Theor Appl Genet       Date:  2006-09-01       Impact factor: 5.699

2.  The potentiality of rice microsatellite markers in assessment of cross-species transferability and genetic diversity of rice and its wild relatives.

Authors:  Umakanta Ngangkham; Sofini Dash; Madhuchhanda Parida; Sanghamitra Samantaray; Devachandra Nongthombam; Manoj Kumar Yadav; Awadhesh Kumar; Parameswaran Chidambaranathan; Jawahar L Katara; Bhaskar C Patra; Lotan K Bose
Journal:  3 Biotech       Date:  2019-05-20       Impact factor: 2.406

3.  Genetic variation in ecoraces of tropical tasar silkworm, Antheraea mylitta using SSR markers.

Authors:  G Renuka; G Shamitha
Journal:  J Genet       Date:  2016-12       Impact factor: 1.166

4.  SSR markers: a tool for species identification in Psidium (Myrtaceae).

Authors:  A C Tuler; T T Carrijo; L R Nóia; A Ferreira; A L Peixoto; M F da Silva Ferreira
Journal:  Mol Biol Rep       Date:  2015-11       Impact factor: 2.316

5.  Cross-species amplification of Medicago truncatula microsatellites across three major pulse crops.

Authors:  M V Gutierrez; M C Vaz Patto; T Huguet; J I Cubero; M T Moreno; A M Torres
Journal:  Theor Appl Genet       Date:  2005-04-02       Impact factor: 5.699

6.  Rapid development of 36 polymorphic microsatellite markers for Tetranychus truncatus by transferring from Tetranychus urticae.

Authors:  Cheng Ge; Jing-Tao Sun; Yu-Nan Cui; Xiao-Yue Hong
Journal:  Exp Appl Acarol       Date:  2013-03-09       Impact factor: 2.132

7.  High variability and disomic segregation of microsatellites in the octoploid Fragaria virginiana Mill. (Rosaceae).

Authors:  M V Ashley; J A Wilk; S M N Styan; K J Craft; K L Jones; K A Feldheim; K S Lewers; T L Ashman
Journal:  Theor Appl Genet       Date:  2003-08-08       Impact factor: 5.699

8.  rbcL, a potential candidate DNA barcode loci for aconites: conservation of himalayan aconites.

Authors:  Ranjana K Negi; Pooja Nautiyal; Rajneesh Bhatia; Rakesh Verma
Journal:  Mol Biol Rep       Date:  2021-09-02       Impact factor: 2.316

9.  Genetic structure and diversity of indigenous rice (Oryza sativa) varieties in the Eastern Himalayan region of Northeast India.

Authors:  Baharul Choudhury; Mohamed Latif Khan; Selvadurai Dayanandan
Journal:  Springerplus       Date:  2013-05-19

10.  Frequency, type, and distribution of EST-SSRs from three genotypes of Lolium perenne, and their conservation across orthologous sequences of Festuca arundinacea, Brachypodium distachyon, and Oryza sativa.

Authors:  Torben Asp; Ursula K Frei; Thomas Didion; Klaus K Nielsen; Thomas Lübberstedt
Journal:  BMC Plant Biol       Date:  2007-07-12       Impact factor: 4.215

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