Literature DB >> 21707668

The circadian clock of Neurospora crassa.

Christopher L Baker1, Jennifer J Loros, Jay C Dunlap.   

Abstract

Circadian clocks organize our inner physiology with respect to the external world, providing life with the ability to anticipate and thereby better prepare for major fluctuations in its environment. Circadian systems are widely represented in nearly all major branches of life, except archaebacteria, and within the eukaryotes, the filamentous fungus Neurospora crassa has served for nearly half a century as a durable model organism for uncovering the basic circadian physiology and molecular biology. Studies using Neurospora have clarified our fundamental understanding of the clock as nested positive and negative feedback loops regulated through transcriptional and post-transcriptional processes. These feedback loops are centered on a limited number of proteins that form molecular complexes, and their regulation provides a physical explanation for nearly all clock properties. This review will introduce the basics of circadian rhythms, the model filamentous fungus N. crassa, and provide an overview of the molecular components and regulation of the circadian clock.
© 2011 Federation of European Microbiological Societies. Published by Blackwell Publishing Ltd. All rights reserved.

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Year:  2011        PMID: 21707668      PMCID: PMC3203324          DOI: 10.1111/j.1574-6976.2011.00288.x

Source DB:  PubMed          Journal:  FEMS Microbiol Rev        ISSN: 0168-6445            Impact factor:   16.408


  119 in total

1.  vvd is required for light adaptation of conidiation-specific genes of Neurospora crassa, but not circadian conidiation.

Authors:  L B Shrode; Z A Lewis; L D White; D Bell-Pedersen; D J Ebbole
Journal:  Fungal Genet Biol       Date:  2001-04       Impact factor: 3.495

2.  Functional significance of FRH in regulating the phosphorylation and stability of Neurospora circadian clock protein FRQ.

Authors:  Jinhu Guo; Ping Cheng; Yi Liu
Journal:  J Biol Chem       Date:  2010-02-16       Impact factor: 5.157

3.  Differential functions of mPer1, mPer2, and mPer3 in the SCN circadian clock.

Authors:  K Bae; X Jin; E S Maywood; M H Hastings; S M Reppert; D R Weaver
Journal:  Neuron       Date:  2001-05       Impact factor: 17.173

4.  Light-independent phosphorylation of WHITE COLLAR-1 regulates its function in the Neurospora circadian negative feedback loop.

Authors:  Qiyang He; Hongjun Shu; Ping Cheng; She Chen; Lixin Wang; Yi Liu
Journal:  J Biol Chem       Date:  2005-02-24       Impact factor: 5.157

5.  The relationship between FRQ-protein stability and temperature compensation in the Neurospora circadian clock.

Authors:  Peter Ruoff; Jennifer J Loros; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2005-11-28       Impact factor: 11.205

6.  VIVID is a flavoprotein and serves as a fungal blue light photoreceptor for photoadaptation.

Authors:  Carsten Schwerdtfeger; Hartmut Linden
Journal:  EMBO J       Date:  2003-09-15       Impact factor: 11.598

7.  Molecular analysis of the period locus in Drosophila melanogaster and identification of a transcript involved in biological rhythms.

Authors:  P Reddy; W A Zehring; D A Wheeler; V Pirrotta; C Hadfield; J C Hall; M Rosbash
Journal:  Cell       Date:  1984-10       Impact factor: 41.582

8.  Illuminating solution responses of a LOV domain protein with photocoupled small-angle X-ray scattering.

Authors:  Jessica S Lamb; Brian D Zoltowski; Suzette A Pabit; Li Li; Brian R Crane; Lois Pollack
Journal:  J Mol Biol       Date:  2009-08-25       Impact factor: 5.469

9.  Conformational switching in the fungal light sensor Vivid.

Authors:  Brian D Zoltowski; Carsten Schwerdtfeger; Joanne Widom; Jennifer J Loros; Alexandrine M Bilwes; Jay C Dunlap; Brian R Crane
Journal:  Science       Date:  2007-05-18       Impact factor: 47.728

Review 10.  Interlocked feedback loops of the circadian clock of Neurospora crassa.

Authors:  Michael Brunner; Krisztina Káldi
Journal:  Mol Microbiol       Date:  2008-02-26       Impact factor: 3.501

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  86 in total

1.  Analysis of clock-regulated genes in Neurospora reveals widespread posttranscriptional control of metabolic potential.

Authors:  Jennifer M Hurley; Arko Dasgupta; Jillian M Emerson; Xiaoying Zhou; Carol S Ringelberg; Nicole Knabe; Anna M Lipzen; Erika A Lindquist; Christopher G Daum; Kerrie W Barry; Igor V Grigoriev; Kristina M Smith; James E Galagan; Deborah Bell-Pedersen; Michael Freitag; Chao Cheng; Jennifer J Loros; Jay C Dunlap
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-31       Impact factor: 11.205

Review 2.  Circadian mRNA expression: insights from modeling and transcriptomics.

Authors:  Sarah Lück; Pål O Westermark
Journal:  Cell Mol Life Sci       Date:  2015-10-26       Impact factor: 9.261

3.  Transcriptional refractoriness is dependent on core promoter architecture.

Authors:  François Cesbron; Michael Oehler; Nati Ha; Gencer Sancar; Michael Brunner
Journal:  Nat Commun       Date:  2015-04-08       Impact factor: 14.919

Review 4.  Dissecting the mechanisms of the clock in Neurospora.

Authors:  Jennifer Hurley; Jennifer J Loros; Jay C Dunlap
Journal:  Methods Enzymol       Date:  2014-12-26       Impact factor: 1.600

5.  Control of Development, Secondary Metabolism and Light-Dependent Carotenoid Biosynthesis by the Velvet Complex of Neurospora crassa.

Authors:  Özlem Sarikaya Bayram; Anne Dettmann; Betim Karahoda; Nicola M Moloney; Tereza Ormsby; Jamie McGowan; Sara Cea-Sánchez; Alejandro Miralles-Durán; Guilherme T P Brancini; Eva M Luque; David A Fitzpatrick; David Cánovas; Luis M Corrochano; Sean Doyle; Eric U Selker; Stephan Seiler; Özgür Bayram
Journal:  Genetics       Date:  2019-05-08       Impact factor: 4.562

6.  Model discrimination in dynamic molecular systems: application to parotid de-differentiation network.

Authors:  Jaejik Kim; Jiaxu Li; Srirangapatnam G Venkatesh; Douglas S Darling; Grzegorz A Rempala
Journal:  J Comput Biol       Date:  2013-07       Impact factor: 1.479

7.  Nucleosome dynamics regulate Neurospora circadian clock.

Authors:  Megumi Hatori; Satchidananda Panda
Journal:  EMBO Rep       Date:  2013-09-13       Impact factor: 8.807

8.  Circadian rhythms in Neurospora crassa on a polydimethylsiloxane microfluidic device for real-time gas perturbations.

Authors:  Kang Kug Lee; Chong H Ahn; Christian I Hong
Journal:  Biomicrofluidics       Date:  2013-08-27       Impact factor: 2.800

9.  A novel cryptochrome-dependent oscillator in Neurospora crassa.

Authors:  Imade Y Nsa; Nirmala Karunarathna; Xiaoguang Liu; Howard Huang; Brittni Boetteger; Deborah Bell-Pedersen
Journal:  Genetics       Date:  2014-10-30       Impact factor: 4.562

10.  The small G protein RAS2 is involved in the metabolic compensation of the circadian clock in the circadian model Neurospora crassa.

Authors:  Norbert Gyöngyösi; Anita Szőke; Krisztina Ella; Krisztina Káldi
Journal:  J Biol Chem       Date:  2017-07-20       Impact factor: 5.157

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