Literature DB >> 21705594

Complete genome sequence of the obligate piezophilic hyperthermophilic archaeon Pyrococcus yayanosii CH1.

Xu Jun1, Liu Lupeng, Xu Minjuan, Philippe Oger, Wang Fengping, Mohamed Jebbar, Xiao Xiang.   

Abstract

Pyrococcus yayanosii CH1 is the first obligate piezophilic hyperthermophilic archaeon isolated from the deep-sea hydrothermal site Ashadze on the mid-Atlantic ridge at a depth of 4,100 m. This organism grows within a temperature range of 80 to 108°C and a hydrostatic pressure range of 20 to 120 MPa, with optima at 98°C and 52 MPa, respectively. Here, we report the complete genome sequence (1,716,817 bp, with a G+C content of 51.6%) of the type strain P. yayanosii CH1(T) (= JCM 16557). This genomic information reveals a systematic view of the piezoadaptation strategy and evolution scenario of metabolic pathways in Thermococcales.

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Year:  2011        PMID: 21705594      PMCID: PMC3147706          DOI: 10.1128/JB.05345-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN: 0021-9193            Impact factor:   3.490


  7 in total

1.  A comparison of proteins from Pyrococcus furiosus and Pyrococcus abyssi: barophily in the physicochemical properties of amino acids and in the genetic code.

Authors:  Massimo Di Giulio
Journal:  Gene       Date:  2004-12-30       Impact factor: 3.688

2.  Complete sequence and gene organization of the genome of a hyper-thermophilic archaebacterium, Pyrococcus horikoshii OT3.

Authors:  Y Kawarabayasi; M Sawada; H Horikawa; Y Haikawa; Y Hino; S Yamamoto; M Sekine; S Baba; H Kosugi; A Hosoyama; Y Nagai; M Sakai; K Ogura; R Otsuka; H Nakazawa; M Takamiya; Y Ohfuku; T Funahashi; T Tanaka; Y Kudoh; J Yamazaki; N Kushida; A Oguchi; K Aoki; H Kikuchi
Journal:  DNA Res       Date:  1998-04-30       Impact factor: 4.458

3.  An integrated analysis of the genome of the hyperthermophilic archaeon Pyrococcus abyssi.

Authors:  Georges N Cohen; Valérie Barbe; Didier Flament; Michael Galperin; Roland Heilig; Odile Lecompte; Olivier Poch; Daniel Prieur; Joël Quérellou; Raymond Ripp; Jean-Claude Thierry; John Van der Oost; Jean Weissenbach; Yvan Zivanovic; Patrick Forterre
Journal:  Mol Microbiol       Date:  2003-03       Impact factor: 3.501

4.  Pyrococcus yayanosii sp. nov., an obligate piezophilic hyperthermophilic archaeon isolated from a deep-sea hydrothermal vent.

Authors:  Jean-Louis Birrien; Xiang Zeng; Mohamed Jebbar; Marie-Anne Cambon-Bonavita; Joël Quérellou; Philippe Oger; Nadège Bienvenu; Xiang Xiao; Daniel Prieur
Journal:  Int J Syst Evol Microbiol       Date:  2011-01-14       Impact factor: 2.747

5.  Divergence of the hyperthermophilic archaea Pyrococcus furiosus and P. horikoshii inferred from complete genomic sequences.

Authors:  D L Maeder; R B Weiss; D M Dunn; J L Cherry; J M González; J DiRuggiero; F T Robb
Journal:  Genetics       Date:  1999-08       Impact factor: 4.562

6.  Pyrococcus CH1, an obligate piezophilic hyperthermophile: extending the upper pressure-temperature limits for life.

Authors:  Xiang Zeng; Jean-Louis Birrien; Yves Fouquet; Georgy Cherkashov; Mohamed Jebbar; Joël Querellou; Philippe Oger; Marie-Anne Cambon-Bonavita; Xiang Xiao; Daniel Prieur
Journal:  ISME J       Date:  2009-03-19       Impact factor: 10.302

7.  The RAST Server: rapid annotations using subsystems technology.

Authors:  Ramy K Aziz; Daniela Bartels; Aaron A Best; Matthew DeJongh; Terrence Disz; Robert A Edwards; Kevin Formsma; Svetlana Gerdes; Elizabeth M Glass; Michael Kubal; Folker Meyer; Gary J Olsen; Robert Olson; Andrei L Osterman; Ross A Overbeek; Leslie K McNeil; Daniel Paarmann; Tobias Paczian; Bruce Parrello; Gordon D Pusch; Claudia Reich; Rick Stevens; Olga Vassieva; Veronika Vonstein; Andreas Wilke; Olga Zagnitko
Journal:  BMC Genomics       Date:  2008-02-08       Impact factor: 3.969

  7 in total
  24 in total

1.  Comparative Detection and Quantification of Arcobacter butzleri in Stools from Diarrheic and Nondiarrheic People in Southwestern Alberta, Canada.

Authors:  Andrew L Webb; Valerie F Boras; Peter Kruczkiewicz; L Brent Selinger; Eduardo N Taboada; G Douglas Inglis
Journal:  J Clin Microbiol       Date:  2016-02-10       Impact factor: 5.948

2.  Induction of a Toxin-Antitoxin Gene Cassette under High Hydrostatic Pressure Enables Markerless Gene Disruption in the Hyperthermophilic Archaeon Pyrococcus yayanosii.

Authors:  Qinghao Song; Zhen Li; Rouke Chen; Xiaopan Ma; Xiang Xiao; Jun Xu
Journal:  Appl Environ Microbiol       Date:  2019-02-06       Impact factor: 4.792

3.  Microbial diversity and adaptation to high hydrostatic pressure in deep-sea hydrothermal vents prokaryotes.

Authors:  Mohamed Jebbar; Bruno Franzetti; Eric Girard; Philippe Oger
Journal:  Extremophiles       Date:  2015-06-23       Impact factor: 2.395

4.  Genetic tools for the piezophilic hyperthermophilic archaeon Pyrococcus yayanosii.

Authors:  Xuegong Li; Ling Fu; Zhen Li; Xiaopan Ma; Xiang Xiao; Jun Xu
Journal:  Extremophiles       Date:  2014-11-13       Impact factor: 2.395

Review 5.  Diversity of CRISPR systems in the euryarchaeal Pyrococcales.

Authors:  Cédric Norais; Annick Moisan; Christine Gaspin; Béatrice Clouet-d'Orval
Journal:  RNA Biol       Date:  2013-02-19       Impact factor: 4.652

6.  Structural features of Cas2 from Thermococcus onnurineus in CRISPR-cas system type IV.

Authors:  Tae-Yang Jung; Kwang-Hyun Park; Yan An; Alexy Schulga; Sergey Deyev; Jong-Hyun Jung; Eui-Jeon Woo
Journal:  Protein Sci       Date:  2016-07-22       Impact factor: 6.725

7.  Characterization of the frhAGB-encoding hydrogenase from a non-methanogenic hyperthermophilic archaeon.

Authors:  Jeong Ho Jeon; Jae Kyu Lim; Min-Sik Kim; Tae-Jun Yang; Seong-Hyuk Lee; Seung Seob Bae; Yun Jae Kim; Sang Hee Lee; Jung-Hyun Lee; Sung Gyun Kang; Hyun Sook Lee
Journal:  Extremophiles       Date:  2014-08-21       Impact factor: 2.395

8.  Analysis of the complete genome sequence of the archaeon Pyrococcus chitonophagus DSM 10152 (formerly Thermococcus chitonophagus).

Authors:  Konstantinos Papadimitriou; Panagiotis K Baharidis; Anastasios Georgoulis; Marion Engel; Maria Louka; Georgia Karamolegkou; Aggeliki Tsoka; Jochen Blom; Bruno Pot; Piotr Malecki; Wojciech Rypniewski; Harald Huber; Michael Schloter; Constantinos Vorgias
Journal:  Extremophiles       Date:  2016-03-25       Impact factor: 2.395

9.  Genetic manipulations of the hyperthermophilic piezophilic archaeon Thermococcus barophilus.

Authors:  Axel Thiel; Grégoire Michoud; Yann Moalic; Didier Flament; Mohamed Jebbar
Journal:  Appl Environ Microbiol       Date:  2014-01-31       Impact factor: 4.792

10.  Purification and characterization of a thermostable aliphatic amidase from the hyperthermophilic archaeon Pyrococcus yayanosii CH1.

Authors:  Ling Fu; Xuegong Li; Xiang Xiao; Jun Xu
Journal:  Extremophiles       Date:  2014-01-16       Impact factor: 2.395

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