Literature DB >> 21705394

Predicting functional cortical ROIs via DTI-derived fiber shape models.

Tuo Zhang1, Lei Guo, Kaiming Li, Changfeng Jing, Yan Yin, Dajiang Zhu, Guangbin Cui, Lingjiang Li, Tianming Liu.   

Abstract

Studying structural and functional connectivities of human cerebral cortex has drawn significant interest and effort recently. A fundamental and challenging problem arises when attempting to measure the structural and/or functional connectivities of specific cortical networks: how to identify and localize the best possible regions of interests (ROIs) on the cortex? In our view, the major challenges come from uncertainties in ROI boundary definition, the remarkable structural and functional variability across individuals and high nonlinearities within and around ROIs. In this paper, we present a novel ROI prediction framework that localizes ROIs in individual brains based on their learned fiber shape models from multimodal task-based functional magnetic resonance imaging (fMRI) and diffusion tensor imaging (DTI) data. In the training stage, shape models of white matter fibers are learnt from those emanating from the functional ROIs, which are activated brain regions detected from task-based fMRI data. In the prediction stage, functional ROIs are predicted in individual brains based only on DTI data. Our experiment results show that the average ROI prediction error is around 3.94 mm, in comparison with benchmark data provided by working memory and visual task-based fMRI. Our work demonstrated that fiber bundle shape models derived from DTI data are good predictors of functional cortical ROIs.

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Year:  2011        PMID: 21705394      PMCID: PMC3306573          DOI: 10.1093/cercor/bhr152

Source DB:  PubMed          Journal:  Cereb Cortex        ISSN: 1047-3211            Impact factor:   5.357


  28 in total

1.  Spatial and temporal independent component analysis of functional MRI data containing a pair of task-related waveforms.

Authors:  V D Calhoun; T Adali; G D Pearlson; J J Pekar
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2.  Single-trial variability in event-related BOLD signals.

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Journal:  Neuroimage       Date:  2002-04       Impact factor: 6.556

Review 3.  Update on the magnetic resonance imaging core of the Alzheimer's disease neuroimaging initiative.

Authors:  Clifford R Jack; Matt A Bernstein; Bret J Borowski; Jeffrey L Gunter; Nick C Fox; Paul M Thompson; Norbert Schuff; Gunnar Krueger; Ronald J Killiany; Charles S Decarli; Anders M Dale; Owen W Carmichael; Duygu Tosun; Michael W Weiner
Journal:  Alzheimers Dement       Date:  2010-05       Impact factor: 21.566

4.  Investigating directed cortical interactions in time-resolved fMRI data using vector autoregressive modeling and Granger causality mapping.

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Journal:  Magn Reson Imaging       Date:  2003-12       Impact factor: 2.546

5.  HAMMER: hierarchical attribute matching mechanism for elastic registration.

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Journal:  IEEE Trans Med Imaging       Date:  2002-11       Impact factor: 10.048

Review 6.  The anatomical basis of functional localization in the cortex.

Authors:  Richard E Passingham; Klaas E Stephan; Rolf Kötter
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7.  Dynamic causal modelling.

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Review 8.  MR connectomics: Principles and challenges.

Authors:  Patric Hagmann; Leila Cammoun; Xavier Gigandet; Stephan Gerhard; P Ellen Grant; Van Wedeen; Reto Meuli; Jean-Philippe Thiran; Christopher J Honey; Olaf Sporns
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9.  Analysis of fMRI data by blind separation into independent spatial components.

Authors:  M J McKeown; S Makeig; G G Brown; T P Jung; S S Kindermann; A J Bell; T J Sejnowski
Journal:  Hum Brain Mapp       Date:  1998       Impact factor: 5.038

10.  Fuzzy clustering of gradient-echo functional MRI in the human visual cortex. Part I: reproducibility.

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Journal:  J Magn Reson Imaging       Date:  1997 Nov-Dec       Impact factor: 4.813

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  30 in total

1.  DICCCOL: dense individualized and common connectivity-based cortical landmarks.

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Journal:  Cereb Cortex       Date:  2012-04-05       Impact factor: 5.357

2.  Subject-specific functional parcellation via prior based eigenanatomy.

Authors:  Paramveer S Dhillon; David A Wolk; Sandhitsu R Das; Lyle H Ungar; James C Gee; Brian B Avants
Journal:  Neuroimage       Date:  2014-05-20       Impact factor: 6.556

3.  Identifying Cross-individual Correspondences of 3-hinge Gyri.

Authors:  Tuo Zhang; Ying Huang; Lin Zhao; Zhibin He; Xi Jiang; Lei Guo; Xiaoping Hu; Tianming Liu
Journal:  Med Image Anal       Date:  2020-04-13       Impact factor: 8.545

4.  Encoding brain network response to free viewing of videos.

Authors:  Junwei Han; Shijie Zhao; Xintao Hu; Lei Guo; Tianming Liu
Journal:  Cogn Neurodyn       Date:  2014-04-20       Impact factor: 5.082

5.  A linear model for characterization of synchronization frequencies of neural networks.

Authors:  Peili Lv; Xintao Hu; Jinglei Lv; Junwei Han; Lei Guo; Tianming Liu
Journal:  Cogn Neurodyn       Date:  2013-07-23       Impact factor: 5.082

6.  Meta-analysis of functional roles of DICCCOLs.

Authors:  Yixuan Yuan; Xi Jiang; Dajiang Zhu; Hanbo Chen; Kaiming Li; Peili Lv; Xiang Yu; Xiaojin Li; Shu Zhang; Tuo Zhang; Xintao Hu; Junwei Han; Lei Guo; Tianming Liu
Journal:  Neuroinformatics       Date:  2013-01

7.  Predictive models of resting state networks for assessment of altered functional connectivity in MCI.

Authors:  Xi Jiang; Dajiang Zhu; Kaiming Li; Tuo Zhang; Dinggang Shen; Lei Guo; Tianming Liu
Journal:  Med Image Comput Comput Assist Interv       Date:  2013

8.  Predictive models of resting state networks for assessment of altered functional connectivity in mild cognitive impairment.

Authors:  Xi Jiang; Dajiang Zhu; Kaiming Li; Tuo Zhang; Lihong Wang; Dinggang Shen; Lei Guo; Tianming Liu
Journal:  Brain Imaging Behav       Date:  2014-12       Impact factor: 3.978

9.  Fine-granularity functional interaction signatures for characterization of brain conditions.

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10.  Dynamic functional connectomics signatures for characterization and differentiation of PTSD patients.

Authors:  Xiang Li; Dajiang Zhu; Xi Jiang; Changfeng Jin; Xin Zhang; Lei Guo; Jing Zhang; Xiaoping Hu; Lingjiang Li; Tianming Liu
Journal:  Hum Brain Mapp       Date:  2013-05-14       Impact factor: 5.038

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