Literature DB >> 21705323

Studies on human DNA polymerase epsilon and GINS complex and their role in DNA replication.

Vladimir P Bermudez1, Andrea Farina, Vineetha Raghavan, Inger Tappin, Jerard Hurwitz.   

Abstract

In eukaryotic cells, DNA replication is carried out by the coordinated action of three DNA polymerases (Pols), Pol α, δ, and ε. In this report, we describe the reconstitution of the human four-subunit Pol ε and characterization of its catalytic properties in comparison with Pol α and Pol δ. Human Pol ε holoenzyme is a monomeric complex containing stoichiometric subunit levels of p261/Pol 2, p59, p17, and p12. We show that the Pol ε p261 N-terminal catalytic domain is solely responsible for its ability to catalyze DNA synthesis. Importantly, human Pol (hPol) ε was found more processive than hPol δ in supporting proliferating cell nuclear antigen-dependent elongation of DNA chains, which is in keeping with proposed roles for hPol ε and hPol δ in the replication of leading and lagging strands, respectively. Furthermore, GINS, a component of the replicative helicase complex that is composed of Sld5, Psf1, Psf2, and Psf3, was shown to interact weakly with all three replicative DNA Pols (α, δ, and ε) and to markedly stimulate the activities of Pol α and Pol ε. In vivo studies indicated that siRNA-targeted depletion of hPol δ and/or hPol ε reduced cell cycle progression and the rate of fork progression. Under the conditions used, we noted that depletion of Pol ε had a more pronounced inhibitory effect on cellular DNA replication than depletion of Pol δ. We suggest that reduction in the level of Pol δ may be less deleterious because of its collision-and-release role in lagging strand synthesis.

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Year:  2011        PMID: 21705323      PMCID: PMC3190704          DOI: 10.1074/jbc.M111.256289

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  57 in total

1.  DNA polymerase epsilon is required for coordinated and efficient chromosomal DNA replication in Xenopus egg extracts.

Authors:  S Waga; T Masuda; H Takisawa; A Sugino
Journal:  Proc Natl Acad Sci U S A       Date:  2001-04-10       Impact factor: 11.205

2.  Structure of DNA polymerase delta from Saccharomyces cerevisiae.

Authors:  E Johansson; J Majka; P M Burgers
Journal:  J Biol Chem       Date:  2001-09-21       Impact factor: 5.157

3.  Structure and function of the fourth subunit (Dpb4p) of DNA polymerase epsilon in Saccharomyces cerevisiae.

Authors:  T Ohya; S Maki; Y Kawasaki; A Sugino
Journal:  Nucleic Acids Res       Date:  2000-10-15       Impact factor: 16.971

Review 4.  The eukaryotic replicative DNA polymerases take shape.

Authors:  Erik Johansson; Stuart A Macneill
Journal:  Trends Biochem Sci       Date:  2010-02-15       Impact factor: 13.807

5.  Reconstitution and characterization of the human DNA polymerase delta four-subunit holoenzyme.

Authors:  Bin Xie; Nayef Mazloum; Li Liu; Amal Rahmeh; Hao Li; Marietta Y W T Lee
Journal:  Biochemistry       Date:  2002-11-05       Impact factor: 3.162

6.  Identification and cloning of two histone fold motif-containing subunits of HeLa DNA polymerase epsilon.

Authors:  Y Li; Z F Pursell; S Linn
Journal:  J Biol Chem       Date:  2000-07-28       Impact factor: 5.157

7.  Schizosaccharomyces pombe cells lacking the amino-terminal catalytic domains of DNA polymerase epsilon are viable but require the DNA damage checkpoint control.

Authors:  W Feng; G D'Urso
Journal:  Mol Cell Biol       Date:  2001-07       Impact factor: 4.272

8.  Structure and activity associated with multiple forms of Schizosaccharomyces pombe DNA polymerase delta.

Authors:  S Zuo; V Bermudez; G Zhang; Z Kelman; J Hurwitz
Journal:  J Biol Chem       Date:  2000-02-18       Impact factor: 5.157

9.  Xenopus Mcm10 binds to origins of DNA replication after Mcm2-7 and stimulates origin binding of Cdc45.

Authors:  James A Wohlschlegel; Suman K Dhar; Tatyana A Prokhorova; Anindya Dutta; Johannes C Walter
Journal:  Mol Cell       Date:  2002-02       Impact factor: 17.970

10.  The influence of the Cdc27 subunit on the properties of the Schizosaccharomyces pombe DNA polymerase delta.

Authors:  Vladimir P Bermudez; Stuart A MacNeill; Inger Tappin; Jerard Hurwitz
Journal:  J Biol Chem       Date:  2002-07-17       Impact factor: 5.157

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  46 in total

1.  Properties of the human Cdc45/Mcm2-7/GINS helicase complex and its action with DNA polymerase epsilon in rolling circle DNA synthesis.

Authors:  Young-Hoon Kang; Wiebke Chemnitz Galal; Andrea Farina; Inger Tappin; Jerard Hurwitz
Journal:  Proc Natl Acad Sci U S A       Date:  2012-04-02       Impact factor: 11.205

2.  Kinetic mechanism of DNA polymerization catalyzed by human DNA polymerase ε.

Authors:  Walter J Zahurancik; Seth J Klein; Zucai Suo
Journal:  Biochemistry       Date:  2013-09-26       Impact factor: 3.162

Review 3.  Replicative DNA polymerases.

Authors:  Erik Johansson; Nicholas Dixon
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-06-01       Impact factor: 10.005

4.  The tail that wags the dog: p12, the smallest subunit of DNA polymerase δ, is degraded by ubiquitin ligases in response to DNA damage and during cell cycle progression.

Authors:  Marietta Y W T Lee; Sufang Zhang; Szu Hua Sharon Lin; Xiaoxiao Wang; Zbigniew Darzynkiewicz; Zhongtao Zhang; Ernest Y C Lee
Journal:  Cell Cycle       Date:  2013-12-03       Impact factor: 4.534

5.  Both high-fidelity replicative and low-fidelity Y-family polymerases are involved in DNA rereplication.

Authors:  Takayuki Sekimoto; Tsukasa Oda; Kiminori Kurashima; Fumio Hanaoka; Takayuki Yamashita
Journal:  Mol Cell Biol       Date:  2014-12-08       Impact factor: 4.272

6.  CMG helicase and DNA polymerase ε form a functional 15-subunit holoenzyme for eukaryotic leading-strand DNA replication.

Authors:  Lance D Langston; Dan Zhang; Olga Yurieva; Roxana E Georgescu; Jeff Finkelstein; Nina Y Yao; Chiara Indiani; Mike E O'Donnell
Journal:  Proc Natl Acad Sci U S A       Date:  2014-10-13       Impact factor: 11.205

Review 7.  Emerging critical roles of Fe-S clusters in DNA replication and repair.

Authors:  Jill O Fuss; Chi-Lin Tsai; Justin P Ishida; John A Tainer
Journal:  Biochim Biophys Acta       Date:  2015-02-02

8.  Crystal structure of the human Polϵ B-subunit in complex with the C-terminal domain of the catalytic subunit.

Authors:  Andrey G Baranovskiy; Jianyou Gu; Nigar D Babayeva; Igor Kurinov; Youri I Pavlov; Tahir H Tahirov
Journal:  J Biol Chem       Date:  2017-07-26       Impact factor: 5.157

Review 9.  Modulation of mutagenesis in eukaryotes by DNA replication fork dynamics and quality of nucleotide pools.

Authors:  Irina S-R Waisertreiger; Victoria G Liston; Miriam R Menezes; Hyun-Min Kim; Kirill S Lobachev; Elena I Stepchenkova; Tahir H Tahirov; Igor B Rogozin; Youri I Pavlov
Journal:  Environ Mol Mutagen       Date:  2012-10-10       Impact factor: 3.216

10.  Mechanism of asymmetric polymerase assembly at the eukaryotic replication fork.

Authors:  Roxana E Georgescu; Lance Langston; Nina Y Yao; Olga Yurieva; Dan Zhang; Jeff Finkelstein; Tani Agarwal; Mike E O'Donnell
Journal:  Nat Struct Mol Biol       Date:  2014-07-06       Impact factor: 15.369

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