Literature DB >> 21693647

Measurement of c-axis angular orientation in calcite (CaCO3) nanocrystals using X-ray absorption spectroscopy.

P U P A Gilbert1, Anthony Young, Susan N Coppersmith.   

Abstract

We demonstrate that the ability to manipulate the polarization of synchrotron radiation can be exploited to enhance the capabilities of X-ray absorption near-edge structure (XANES) spectroscopy, to include linear dichroism effects. By acquiring spectra at the same photon energies but different polarizations, and using a photoelectron emission spectromicroscope (PEEM), one can quantitatively determine the angular orientation of micro- and nanocrystals with a spatial resolution down to 10 nm. XANES-PEEM instruments are already present at most synchrotrons, hence these methods are readily available. The methods are demonstrated here on geologic calcite (CaCO(3)) and used to investigate the prismatic layer of a mollusk shell, Pinctada fucata. These XANES-PEEM data reveal multiply oriented nanocrystals within calcite prisms, previously thought to be monocrystalline. The subdivision into multiply oriented nanocrystals, spread by more than 50°, may explain the excellent mechanical properties of the prismatic layer, known for decades but never explained.

Entities:  

Year:  2011        PMID: 21693647      PMCID: PMC3136314          DOI: 10.1073/pnas.1107917108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  17 in total

1.  Compensation of charging in X-PEEM: a successful test on mineral inclusions in 4.4 Ga old zircon.

Authors:  Gelsomina De Stasio; Bradley H Frazer; Benjamin Gilbert; Katherine L Richter; John W Valley
Journal:  Ultramicroscopy       Date:  2003-12       Impact factor: 2.689

2.  Variable linear polarization from an X-ray undulator.

Authors:  A T Young; E Arenholz; S Marks; R Schlueter; C Steier; H A Padmore; A P Hitchcock; D G Castner
Journal:  J Synchrotron Radiat       Date:  2002-06-30       Impact factor: 2.616

3.  Hemocyte-mediated shell mineralization in the eastern oyster.

Authors:  Andrew S Mount; A P Wheeler; Rajesh P Paradkar; D Snider
Journal:  Science       Date:  2004-04-09       Impact factor: 47.728

4.  The nature and formation of calcitic columnar prismatic shell layers in pteriomorphian bivalves.

Authors:  Antonio Gerardo Checa; Alejandro B Rodríguez-Navarro; Fransico J Esteban-Delgado
Journal:  Biomaterials       Date:  2005-11       Impact factor: 12.479

5.  The grinding tip of the sea urchin tooth exhibits exquisite control over calcite crystal orientation and Mg distribution.

Authors:  Yurong Ma; Barbara Aichmayer; Oskar Paris; Peter Fratzl; Anders Meibom; Rebecca A Metzler; Yael Politi; Lia Addadi; P U P A Gilbert; Steve Weiner
Journal:  Proc Natl Acad Sci U S A       Date:  2009-03-30       Impact factor: 11.205

6.  Strong magnetic x-ray dichroism in 2p absorption spectra of 3d transition-metal ions.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1991-06-01

7.  Liquid crystal alignment on carbonaceous surfaces with orientational order.

Authors:  J Stohr; M G Samant; J Luning; A C Callegari; P Chaudhari; J P Doyle; J A Lacey; S A Lien; S Purushothaman; J L Speidell
Journal:  Science       Date:  2001-06-22       Impact factor: 47.728

8.  Mechanism of calcite co-orientation in the sea urchin tooth.

Authors:  Christopher E Killian; Rebecca A Metzler; Y U T Gong; Ian C Olson; Joanna Aizenberg; Yael Politi; Fred H Wilt; Andreas Scholl; Anthony Young; Andrew Doran; Martin Kunz; Nobumichi Tamura; Susan N Coppersmith; P U P A Gilbert
Journal:  J Am Chem Soc       Date:  2009-12-30       Impact factor: 15.419

9.  Soluble organic matrices of the calcitic prismatic shell layers of two Pteriomorphid bivalves. Pinna nobilis and Pinctada margaritifera.

Authors:  Yannicke Dauphin
Journal:  J Biol Chem       Date:  2003-02-07       Impact factor: 5.157

10.  Gradual ordering in red abalone nacre.

Authors:  P U P A Gilbert; Rebecca A Metzler; Dong Zhou; Andreas Scholl; Andrew Doran; Anthony Young; Martin Kunz; Nobumichi Tamura; Susan N Coppersmith
Journal:  J Am Chem Soc       Date:  2008-12-24       Impact factor: 15.419

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  15 in total

1.  Crystal nucleation and growth of spherulites demonstrated by coral skeletons and phase-field simulations.

Authors:  Chang-Yu Sun; László Gránásy; Cayla A Stifler; Tal Zaquin; Rajesh V Chopdekar; Nobumichi Tamura; James C Weaver; Jun A Y Zhang; Stefano Goffredo; Giuseppe Falini; Matthew A Marcus; Tamás Pusztai; Vanessa Schoeppler; Tali Mass; Pupa U P A Gilbert
Journal:  Acta Biomater       Date:  2020-06-23       Impact factor: 8.947

2.  Crystallographic orientation inhomogeneity and crystal splitting in biogenic calcite.

Authors:  Antonio G Checa; Jan T Bonarski; Marc G Willinger; Marek Faryna; Katarzyna Berent; Bogusz Kania; Alicia González-Segura; Carlos M Pina; Jan Pospiech; Adam Morawiec
Journal:  J R Soc Interface       Date:  2013-06-26       Impact factor: 4.118

3.  Revealing crystalline domains in a mollusc shell single-crystalline prism.

Authors:  F Mastropietro; P Godard; M Burghammer; C Chevallard; J Daillant; J Duboisset; M Allain; P Guenoun; J Nouet; V Chamard
Journal:  Nat Mater       Date:  2017-07-10       Impact factor: 43.841

4.  Amorphous calcium carbonate particles form coral skeletons.

Authors:  Tali Mass; Anthony J Giuffre; Chang-Yu Sun; Cayla A Stifler; Matthew J Frazier; Maayan Neder; Nobumichi Tamura; Camelia V Stan; Matthew A Marcus; Pupa U P A Gilbert
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-28       Impact factor: 11.205

5.  Structure-property relationships of a biological mesocrystal in the adult sea urchin spine.

Authors:  Jong Seto; Yurong Ma; Sean A Davis; Fiona Meldrum; Aurelien Gourrier; Yi-Yeoun Kim; Uwe Schilde; Michael Sztucki; Manfred Burghammer; Sergey Maltsev; Christian Jäger; Helmut Cölfen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-02-16       Impact factor: 11.205

6.  Architects of nature: growing buildings with bacterial biofilms.

Authors:  Martyn Dade-Robertson; Alona Keren-Paz; Meng Zhang; Ilana Kolodkin-Gal
Journal:  Microb Biotechnol       Date:  2017-08-16       Impact factor: 5.813

7.  The hidden structure of human enamel.

Authors:  Elia Beniash; Cayla A Stifler; Chang-Yu Sun; Gang Seob Jung; Zhao Qin; Markus J Buehler; Pupa U P A Gilbert
Journal:  Nat Commun       Date:  2019-09-26       Impact factor: 14.919

8.  Hierarchical super-structure identified by polarized light microscopy, electron microscopy and nanoindentation: Implications for the limits of biological control over the growth mode of abalone sea shells.

Authors:  Andreas S Schneider; Ingrid M Weiss; Birgit Heiland; Nicolas J Peter; Christina Guth; Eduard Arzt
Journal:  BMC Biophys       Date:  2012-09-12       Impact factor: 4.778

9.  Peptide induced crystallization of calcium carbonate on wrinkle patterned substrate: implications for chitin formation in molluscs.

Authors:  Anindita Sengupta Ghatak; Marcus Koch; Christina Guth; Ingrid M Weiss
Journal:  Int J Mol Sci       Date:  2013-06-04       Impact factor: 5.923

10.  Spatio-temporal assembly of functional mineral scaffolds within microbial biofilms.

Authors:  Yaara Oppenheimer-Shaanan; Odelia Sibony-Nevo; Zohar Bloom-Ackermann; Ronit Suissa; Nitai Steinberg; Elena Kartvelishvily; Vlad Brumfeld; Ilana Kolodkin-Gal
Journal:  NPJ Biofilms Microbiomes       Date:  2016-03-02       Impact factor: 7.290

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