Literature DB >> 21685609

Drug knowledge expressed as computable semantic triples.

Peter L Elkin1, John S Carter, Manasi Nabar, Mark Tuttle, Michael Lincoln, Steven H Brown.   

Abstract

The majority of questions that arise in the practice of medicine relate to drug information. Additionally, adverse reactions account for as many as 98,000 deaths per year in the United States. Adverse drug reactions account for a significant portion of those errors. Many authors believe that clinical decision support associated with computerized physician order entry has the potential to decrease this adverse drug event rate. This decision support requires knowledge to drive the process. One important and rich source of drug knowledge is the DailyMed product labels. In this project we used computationally extracted SNOMED CT™ codified data associated with each section of each product label as input to a rules engine that created computable assertional knowledge in the form of semantic triples. These are expressed in the form of "Drug" HasIndication "SNOMED CT™". The information density of drug labels is deep, broad and quite substantial. By providing a computable form of this information content from drug labels we make these important axioms (facts) more accessible to computer programs designed to support improved care.

Mesh:

Year:  2011        PMID: 21685609

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  8 in total

1.  Development and evaluation of a crowdsourcing methodology for knowledge base construction: identifying relationships between clinical problems and medications.

Authors:  Allison B McCoy; Adam Wright; Archana Laxmisan; Madelene J Ottosen; Jacob A McCoy; David Butten; Dean F Sittig
Journal:  J Am Med Inform Assoc       Date:  2012-05-12       Impact factor: 4.497

2.  Validation of a Crowdsourcing Methodology for Developing a Knowledge Base of Related Problem-Medication Pairs.

Authors:  A B McCoy; A Wright; M Krousel-Wood; E J Thomas; J A McCoy; D F Sittig
Journal:  Appl Clin Inform       Date:  2015-05-20       Impact factor: 2.342

3.  Development of a clinician reputation metric to identify appropriate problem-medication pairs in a crowdsourced knowledge base.

Authors:  Allison B McCoy; Adam Wright; Deevakar Rogith; Safa Fathiamini; Allison J Ottenbacher; Dean F Sittig
Journal:  J Biomed Inform       Date:  2013-12-07       Impact factor: 6.317

4.  Biomedical Informatics Investigator.

Authors:  Peter L Elkin; Sarah Mullin; Sylvester Sakilay
Journal:  Stud Health Technol Inform       Date:  2018

5.  A bottom-up approach to creating an ontology for medication indications.

Authors:  Stuart J Nelson; Allen Flynn; Mark S Tuttle
Journal:  J Am Med Inform Assoc       Date:  2021-03-18       Impact factor: 4.497

6.  Health care transformation through collaboration on open-source informatics projects: integrating a medical applications platform, research data repository, and patient summarization.

Authors:  Jeffrey G Klann; Allison B McCoy; Adam Wright; Nich Wattanasin; Dean F Sittig; Shawn N Murphy
Journal:  Interact J Med Res       Date:  2013-05-30

7.  Knowledge-based extraction of adverse drug events from biomedical text.

Authors:  Ning Kang; Bharat Singh; Chinh Bui; Zubair Afzal; Erik M van Mulligen; Jan A Kors
Journal:  BMC Bioinformatics       Date:  2014-03-04       Impact factor: 3.169

8.  Formalizing drug indications on the road to therapeutic intent.

Authors:  Stuart J Nelson; Tudor I Oprea; Oleg Ursu; Cristian G Bologa; Amrapali Zaveri; Jayme Holmes; Jeremy J Yang; Stephen L Mathias; Subramani Mani; Mark S Tuttle; Michel Dumontier
Journal:  J Am Med Inform Assoc       Date:  2017-11-01       Impact factor: 4.497

  8 in total

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