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Literature DB >> 21685282

Genome sequence of the 17β-estradiol-utilizing bacterium Sphingomonas strain KC8.

Anyi Hu¹, Jibing He, Kung-Hui Chu, Chang-Ping Yu.

Abstract

Sphingomonas strain KC8 is known for its ability to utilize 17β-estradiol, a natural estrogen and an environmental endocrine-disrupting compound, as the sole carbon and energy source. Here, we report the draft genome sequence of the strain KC8 (4,074,265 bp, with a GC content of 63.7%) and major findings from its annotation.

Entities: Chemical Species

Mesh：

Substances：
Estradiol

Year: 2011 PMID： 21685282 PMCID： PMC3147671 DOI： 10.1128/JB.05356-11

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

14 in total

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Review 3. Endocrine disruption in wildlife: a critical review of the evidence.

Authors: C R Tyler; S Jobling; J P Sumpter
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Review 4. A genomic perspective on protein families.

Authors: R L Tatusov; E V Koonin; D J Lipman
Journal: Science Date: 1997-10-24 Impact factor: 47.728

5. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors: T M Lowe; S R Eddy
Journal: Nucleic Acids Res Date: 1997-03-01 Impact factor: 16.971

6. Degradation characteristics and metabolic pathway of 17alpha-ethynylestradiol by Sphingobacterium sp. JCR5.

Authors: Ren Haiyan; Ji Shulan; Naeem ud din Ahmad; Wang Dao; Cui Chengwu
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7. The genes encoding the hydroxylase of 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione in steroid degradation in Comamonas testosteroni TA441.

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8. KEGG for linking genomes to life and the environment.

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9. GenBank.

Authors: Dennis A Benson; Ilene Karsch-Mizrachi; David J Lipman; James Ostell; David L Wheeler
Journal: Nucleic Acids Res Date: 2007-12-11 Impact factor: 16.971

10. RNAmmer: consistent and rapid annotation of ribosomal RNA genes.

Authors: Karin Lagesen; Peter Hallin; Einar Andreas Rødland; Hans-Henrik Staerfeldt; Torbjørn Rognes; David W Ussery
Journal: Nucleic Acids Res Date: 2007-04-22 Impact factor: 16.971

5 in total

1. Comparison of 26 sphingomonad genomes reveals diverse environmental adaptations and biodegradative capabilities.

Authors: Frank O Aylward; Bradon R McDonald; Sandra M Adams; Alejandra Valenzuela; Rebeccah A Schmidt; Lynne A Goodwin; Tanja Woyke; Cameron R Currie; Garret Suen; Michael Poulsen
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2. Draft Genome Sequence of Triclosan-Degrading Bacterium Sphingomonas sp. Strain YL-JM2C, Isolated from a Wastewater Treatment Plant in China.

Authors: Sikandar I Mulla; Anyi Hu; Haili Xu; Chang-Ping Yu
Journal: Genome Announc Date: 2015-06-04