Literature DB >> 21683259

Using C. elegans to identify the protease targets of serpins in vivo.

Sangeeta R Bhatia1, Mark T Miedel, Cavita K Chotoo, Nathan J Graf, Brian L Hood, Thomas P Conrads, Gary A Silverman, Cliff J Luke.   

Abstract

Most serpins inhibit serine and/or cysteine proteases, and their inhibitory activities are usually defined in vitro. However, the physiological protease targets of most serpins are unknown despite many years of research. This may be due to the rapid degradation of the inactive serpin:protease complexes and/or the conditions under which the serpin inhibits the protease. The model organism Caenorhabditis elegans is an ideal system for identifying protease targets due to powerful forward and reverse genetics, as well as the ease of creating transgenic animals. Using combinatorial approaches of genetics and biochemistry in C. elegans, the true in vivo protease targets of the endogenous serpins can be elucidated.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21683259      PMCID: PMC4374438          DOI: 10.1016/B978-0-12-386471-0.00014-6

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  42 in total

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Authors:  G A Silverman; P I Bird; R W Carrell; F C Church; P B Coughlin; P G Gettins; J A Irving; D A Lomas; C J Luke; R W Moyer; P A Pemberton; E Remold-O'Donnell; G S Salvesen; J Travis; J C Whisstock
Journal:  J Biol Chem       Date:  2001-07-02       Impact factor: 5.157

2.  The NHX family of Na+-H+ exchangers in Caenorhabditis elegans.

Authors:  Keith Nehrke; James E Melvin
Journal:  J Biol Chem       Date:  2002-05-20       Impact factor: 5.157

Review 3.  Serpins flex their muscle: I. Putting the clamps on proteolysis in diverse biological systems.

Authors:  Gary A Silverman; James C Whisstock; Stephen P Bottomley; James A Huntington; Dion Kaiserman; Cliff J Luke; Stephen C Pak; Jean-Marc Reichhart; Phillip I Bird
Journal:  J Biol Chem       Date:  2010-05-24       Impact factor: 5.157

4.  RNAi in C. elegans: soaking in the genome sequence.

Authors:  H Tabara; A Grishok; C C Mello
Journal:  Science       Date:  1998-10-16       Impact factor: 47.728

5.  Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans.

Authors:  A Fire; S Xu; M K Montgomery; S A Kostas; S E Driver; C C Mello
Journal:  Nature       Date:  1998-02-19       Impact factor: 49.962

6.  An ester bond linking a fragment of a serine proteinase to its serpin inhibitor.

Authors:  R Egelund; K W Rodenburg; P A Andreasen; M S Rasmussen; R E Guldberg; T E Petersen
Journal:  Biochemistry       Date:  1998-05-05       Impact factor: 3.162

7.  The C. elegans spe-9 gene encodes a sperm transmembrane protein that contains EGF-like repeats and is required for fertilization.

Authors:  A Singson; K B Mercer; S W L'Hernault
Journal:  Cell       Date:  1998-04-03       Impact factor: 41.582

8.  SRP-2 is a cross-class inhibitor that participates in postembryonic development of the nematode Caenorhabditis elegans: initial characterization of the clade L serpins.

Authors:  Stephen C Pak; Vasantha Kumar; Christopher Tsu; Cliff J Luke; Yuko S Askew; David J Askew; David R Mills; Dieter Brömme; Gary A Silverman
Journal:  J Biol Chem       Date:  2004-01-22       Impact factor: 5.157

Review 9.  Genome sequence of the nematode C. elegans: a platform for investigating biology.

Authors: 
Journal:  Science       Date:  1998-12-11       Impact factor: 47.728

10.  The intracellular granzyme B inhibitor, proteinase inhibitor 9, is up-regulated during accessory cell maturation and effector cell degranulation, and its overexpression enhances CTL potency.

Authors:  Claire E Hirst; Marguerite S Buzza; Catherina H Bird; Hilary S Warren; Paul U Cameron; Manling Zhang; Philip G Ashton-Rickardt; Phillip I Bird
Journal:  J Immunol       Date:  2003-01-15       Impact factor: 5.422

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  4 in total

1.  Animal models of gastrointestinal and liver diseases. Animal models of necrotizing enterocolitis: pathophysiology, translational relevance, and challenges.

Authors:  Peng Lu; Chhinder P Sodhi; Hongpeng Jia; Shahab Shaffiey; Misty Good; Maria F Branca; David J Hackam
Journal:  Am J Physiol Gastrointest Liver Physiol       Date:  2014-04-24       Impact factor: 4.052

2.  Switching off IMMP2L signaling drives senescence via simultaneous metabolic alteration and blockage of cell death.

Authors:  Lifeng Yuan; Linhui Zhai; Lili Qian; Yi Ding; Handan Xiang; Xiaojing Liu; J Will Thompson; Juan Liu; Yong-Han He; Xiao-Qiong Chen; Jing Hu; Qing-Peng Kong; Minjia Tan; Xiao-Fan Wang
Journal:  Cell Res       Date:  2018-05-28       Impact factor: 25.617

3.  Isolation of serpin-interacting proteins in C. elegans using protein affinity purification.

Authors:  Mark T Miedel; Xuemei Zeng; Nathan A Yates; Gary A Silverman; Cliff J Luke
Journal:  Methods       Date:  2014-05-02       Impact factor: 3.608

4.  A pro-cathepsin L mutant is a luminal substrate for endoplasmic-reticulum-associated degradation in C. elegans.

Authors:  Mark T Miedel; Nathan J Graf; Kate E Stephen; Olivia S Long; Stephen C Pak; David H Perlmutter; Gary A Silverman; Cliff J Luke
Journal:  PLoS One       Date:  2012-07-02       Impact factor: 3.240

  4 in total

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