Literature DB >> 21682331

A theoretical rationale for why azetidine has a faster rate of formation than oxetane in TC(6-4) photoproducts.

Zhao bo Yang1, Leif A Eriksson, Ru bo Zhang.   

Abstract

The mechanism of formation of azetidine and oxetane in (6-4) photoproducts between thymine and imine-type cytosine is studied using the MPWB1K and B3LYP functionals together with the 6-31G(d,p) and 6-311++G(d,p) basis sets, in vacuum and bulk solvent. The photoinduced cycloaddition displays favorable energy barriers in the triplet excited state for formation of both azetidine and oxetane. The stepwise cycloaddition in the triplet excited state involves the initial formation of a diradical followed by ring closure via singlet-triplet interaction. The distinguishing feature in the formation of azetidine compared to that of oxetane is an intermediate H3' back-transfer to N3', which is a low-barrier exothermic reaction, and thus shifts the energy balance toward azetidine formation.
© 2011 American Chemical Society

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Year:  2011        PMID: 21682331     DOI: 10.1021/jp204506v

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  2 in total

1.  The effect of DNA backbone on the triplet mechanism of UV-induced thymine-thymine (6-4) dimer formation.

Authors:  Xingyong Wang; Haibo Yu
Journal:  J Mol Model       Date:  2018-10-23       Impact factor: 1.810

2.  Detection of the thietane precursor in the UVA formation of the DNA 6-4 photoadduct.

Authors:  Christian Reichardt; Sean J Hoehn; Luis A Ortiz-Rodríguez; Steffen Jockusch; Carlos E Crespo-Hernández
Journal:  Nat Commun       Date:  2020-07-17       Impact factor: 14.919

  2 in total

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