Literature DB >> 21679114

Proteomics moves from expression to turnover: update and future perspective.

Mary K Doherty1, Phillip D Whitfield.   

Abstract

Proteomics is a rapidly developing discipline that seeks to understand the role of proteins in the wider biological context. In order to take a holistic view of a biological system, it is vital that we can elucidate the dynamics of the proteome. In this article, we have outlined the recent advances in experimental strategies for measuring protein synthesis and degradation on a proteome-wide scale. The application of mass spectrometry and non-mass spectrometric-based approaches in this field of research has been discussed. The article also explores the challenges associated with these types of analyses and the development of appropriate bioinformatic resources for interrogating the complex datasets that are generated.

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Year:  2011        PMID: 21679114     DOI: 10.1586/epr.11.19

Source DB:  PubMed          Journal:  Expert Rev Proteomics        ISSN: 1478-9450            Impact factor:   3.940


  8 in total

Review 1.  Building muscle: molecular regulation of myogenesis.

Authors:  C Florian Bentzinger; Yu Xin Wang; Michael A Rudnicki
Journal:  Cold Spring Harb Perspect Biol       Date:  2012-02-01       Impact factor: 10.005

2.  Stage-Specific Gene Profiling of Germinal Cells Helps Delineate the Mitosis/Meiosis Transition.

Authors:  Ting-Lu Yuan; Wei-Jie Huang; Juan He; Dong Zhang; Wei-Hua Tang
Journal:  Plant Physiol       Date:  2017-11-29       Impact factor: 8.340

Review 3.  Proteome dynamics: revisiting turnover with a global perspective.

Authors:  Amy J Claydon; Robert Beynon
Journal:  Mol Cell Proteomics       Date:  2012-11-02       Impact factor: 5.911

4.  Plasma proteome dynamics: analysis of lipoproteins and acute phase response proteins with 2H2O metabolic labeling.

Authors:  Ling Li; Belinda Willard; Nadia Rachdaoui; John P Kirwan; Rovshan G Sadygov; William C Stanley; Stephen Previs; Arthur J McCullough; Takhar Kasumov
Journal:  Mol Cell Proteomics       Date:  2012-03-05       Impact factor: 5.911

5.  Individuals Maintain Similar Rates of Protein Synthesis over Time on the Same Plane of Nutrition under Controlled Environmental Conditions.

Authors:  Ian D McCarthy; Stewart F Owen; Peter W Watt; Dominic F Houlihan
Journal:  PLoS One       Date:  2016-03-28       Impact factor: 3.240

6.  Dietary Probiotic Effect of Lactococcus lactis WFLU12 on Low-Molecular-Weight Metabolites and Growth of Olive Flounder (Paralichythys olivaceus).

Authors:  Thanh Luan Nguyen; Won-Kyong Chun; Ahran Kim; Nameun Kim; Heyong Jin Roh; Yoonhang Lee; Myunggi Yi; Suhkmann Kim; Chan-Il Park; Do-Hyung Kim
Journal:  Front Microbiol       Date:  2018-09-05       Impact factor: 5.640

7.  A six-plex proteome quantification strategy reveals the dynamics of protein turnover.

Authors:  Fangjun Wang; Kai Cheng; Xiaoluan Wei; Hongqiang Qin; Rui Chen; Jing Liu; Hanfa Zou
Journal:  Sci Rep       Date:  2013       Impact factor: 4.379

8.  Profound re-organization of cell surface proteome in equine retinal pigment epithelial cells in response to in vitro culturing.

Authors:  Christoph M Szober; Stefanie M Hauck; Kerstin N Euler; Kristina J H Fröhlich; Claudia Alge-Priglinger; Marius Ueffing; Cornelia A Deeg
Journal:  Int J Mol Sci       Date:  2012-10-31       Impact factor: 5.923

  8 in total

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