Literature DB >> 21677640

Can network analysis improve pattern recognition among adverse events following immunization reported to VAERS?

R Ball1, T Botsis.   

Abstract

Current methods of statistical data mining are limited in their ability to facilitate the identification of patterns of potential clinical interest from spontaneous reporting systems of medical product adverse events (AEs). Network analysis (NA) allows for simultaneous representation of complex connections among the key elements of such a system. The Vaccine Adverse Event Reporting System (VAERS) can be represented as a network of 6,428 nodes (74 vaccines and 6,354 AEs) with more than 1.4 million interlinkages. VAERS has the characteristics of a "scale-free" network, with certain vaccines and AEs acting as "hubs" in the network. Known safety signals were visualized using NA methods, including hub identification. NA offers a complementary approach to current statistical data-mining techniques for visualizing multidimensional patterns, providing a structural framework for evaluating AE data.

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Substances:

Year:  2011        PMID: 21677640     DOI: 10.1038/clpt.2011.119

Source DB:  PubMed          Journal:  Clin Pharmacol Ther        ISSN: 0009-9236            Impact factor:   6.875


  12 in total

1.  Application of Natural Language Processing and Network Analysis Techniques to Post-market Reports for the Evaluation of Dose-related Anti-Thymocyte Globulin Safety Patterns.

Authors:  Taxiarchis Botsis; Matthew Foster; Nina Arya; Kory Kreimeyer; Abhishek Pandey; Deepa Arya
Journal:  Appl Clin Inform       Date:  2017-04-26       Impact factor: 2.342

2.  Automating case definitions using literature-based reasoning.

Authors:  T Botsis; R Ball
Journal:  Appl Clin Inform       Date:  2013-10-30       Impact factor: 2.342

3.  Simulating adverse event spontaneous reporting systems as preferential attachment networks: application to the Vaccine Adverse Event Reporting System.

Authors:  J Scott; T Botsis; R Ball
Journal:  Appl Clin Inform       Date:  2014-03-05       Impact factor: 2.342

Review 4.  Novel data-mining methodologies for adverse drug event discovery and analysis.

Authors:  R Harpaz; W DuMouchel; N H Shah; D Madigan; P Ryan; C Friedman
Journal:  Clin Pharmacol Ther       Date:  2012-06       Impact factor: 6.875

Review 5.  Machine Learning in Causal Inference: Application in Pharmacovigilance.

Authors:  Yiqing Zhao; Yue Yu; Hanyin Wang; Yikuan Li; Yu Deng; Guoqian Jiang; Yuan Luo
Journal:  Drug Saf       Date:  2022-05-17       Impact factor: 5.228

6.  "Artificial Intelligence" for Pharmacovigilance: Ready for Prime Time?

Authors:  Robert Ball; Gerald Dal Pan
Journal:  Drug Saf       Date:  2022-05-17       Impact factor: 5.228

7.  Identification of sex-associated network patterns in Vaccine-Adverse Event Association Network in VAERS.

Authors:  Yuji Zhang; Puqiang Wu; Yi Luo; Cui Tao
Journal:  J Biomed Semantics       Date:  2015-08-19

8.  Network-based analysis of vaccine-related associations reveals consistent knowledge with the vaccine ontology.

Authors:  Yuji Zhang; Cui Tao; Yongqun He; Pradip Kanjamala; Hongfang Liu
Journal:  J Biomed Semantics       Date:  2013-11-11

9.  Automatically Recognizing Medication and Adverse Event Information From Food and Drug Administration's Adverse Event Reporting System Narratives.

Authors:  Balaji Polepalli Ramesh; Steven M Belknap; Zuofeng Li; Nadya Frid; Dennis P West; Hong Yu
Journal:  JMIR Med Inform       Date:  2014-06-27

10.  Identifying Plant-Human Disease Associations in Biomedical Literature: A Case Study.

Authors:  Vivekanand Sharma; Wayne Law; Michael J Balick; Indra Neil Sarkar
Journal:  AMIA Jt Summits Transl Sci Proc       Date:  2016-07-19
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