Literature DB >> 21669923

Ruegeria halocynthiae sp. nov., isolated from the sea squirt Halocynthia roretzi.

Young-Ok Kim1, Sooyeon Park2, Bo-Hye Nam1, So-Jung Kang2, Young Baek Hur3, Sang-Jun Lee1, Tae-Kwang Oh2, Jung-Hoon Yoon4.   

Abstract

A Gram-negative, non-motile, rod-shaped bacterial strain, designated MA1-6T, was isolated from a sea squirt (Halocynthia roretzi) collected from the South Sea, Korea, and was characterized to determine its taxonomic position. Strain MA1-6T grew optimally at pH 7.0-8.0, at 30 °C and in the presence of 2-3 % (w/v) NaCl. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain MA1-6T fell within the clade comprising Ruegeria species and exhibited 95.3-96.5 % similarity to the type strains of recognized Ruegeria species. Strain MA1-6T contained Q-10 as the predominant ubiquinone and C18:1ω7c as the major fatty acid, which is consistent with data for Ruegeria species. The major polar lipids detected in strain MA1-6T and Ruegeria atlantica KCTC 12424T were phosphatidylcholine, phosphatidylglycerol, an unidentified aminolipid and an unidentified lipid. The DNA G+C content of strain MA1-6T was 58.6 mol%. Differential phenotypic properties, together with phylogenetic distinctiveness, demonstrated that strain MA1-6T can be distinguished from recognized Ruegeria species. On the basis of phenotypic, chemotaxonomic and phylogenetic data, strain MA1-6T is considered to represent a novel species of the genus Ruegeria, for which the name Ruegeria halocynthiae sp. nov. is proposed; the type strain is MA1-6T (=KCTC 23463T=CCUG 60744T).

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Year:  2011        PMID: 21669923     DOI: 10.1099/ijs.0.031609-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  5 in total

1.  Draft genome sequence of the marine Rhodobacteraceae strain O3.65, cultivated from oil-polluted seawater of the Deepwater Horizon oil spill.

Authors:  Helge-Ansgar Giebel; Franziska Klotz; Sonja Voget; Anja Poehlein; Katrin Grosser; Andreas Teske; Thorsten Brinkhoff
Journal:  Stand Genomic Sci       Date:  2016-10-13

2.  Phylogenetic Analysis and Screening of Antimicrobial and Antiproliferative Activities of Culturable Bacteria Associated with the Ascidian Styela clava from the Yellow Sea, China.

Authors:  Lei Chen; Xue-Ning Wang; Chang-Ming Fu; Guang-Yu Wang
Journal:  Biomed Res Int       Date:  2019-08-28       Impact factor: 3.411

3.  Genome sequence of Phaeobacter inhibens type strain (T5(T)), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens.

Authors:  Marco Dogs; Sonja Voget; Hazuki Teshima; Jörn Petersen; Karen Davenport; Hajnalka Dalingault; Amy Chen; Amrita Pati; Natalia Ivanova; Lynne A Goodwin; Patrick Chain; John C Detter; Sonja Standfest; Manfred Rohde; Sabine Gronow; Nikos C Kyrpides; Tanja Woyke; Meinhard Simon; Hans-Peter Klenk; Markus Göker; Thorsten Brinkhoff
Journal:  Stand Genomic Sci       Date:  2013-12-15

4.  Two new cholic acid derivatives from the marine ascidian-associated bacterium Hasllibacter halocynthiae.

Authors:  Sung Hun Kim; Yun Kyung Shin; Young Chang Sohn; Hak Cheol Kwon
Journal:  Molecules       Date:  2012-10-22       Impact factor: 4.411

Review 5.  Biological and Chemical Diversity of Ascidian-Associated Microorganisms.

Authors:  Lei Chen; Jin-Shuang Hu; Jia-Lei Xu; Chang-Lun Shao; Guang-Yu Wang
Journal:  Mar Drugs       Date:  2018-10-01       Impact factor: 5.118

  5 in total

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