Literature DB >> 21667242

Molecular cloning and characterization of an F-box family gene CarF-box1 from chickpea (Cicer arietinum L.).

Yuying Jia1, Hanyan Gu, Xiansheng Wang, Quanjia Chen, Shubing Shi, Jusong Zhang, Lin Ma, Hua Zhang, Hao Ma.   

Abstract

F-box protein family has been found to play important roles in plant development and abiotic stress responses via the ubiquitin pathway. In this study, an F-box gene CarF-box1 (for Cicer arietinum F-box gene 1, Genbank accession no. GU247510) was isolated based on a cDNA library constructed with chickpea seedling leaves treated by polyethylene glycol. CarF-box1 encoded a putative protein with 345 amino acids and contained no intron within genomic DNA sequence. CarF-box1 is a KFB-type F-box protein, having a conserved F-box domain in the N-terminus and a Kelch repeat domain in the C-terminus. CarF-box1 was localized in the nucleus. CarF-box1 exhibited organ-specific expression and showed different expression patterns during seed development and germination processes, especially strongly expressed in the blooming flowers. In the leaves, CarF-box1 could be significantly induced by drought stress and slightly induced by IAA treatment, while in the roots, CarF-box1 could be strongly induced by drought, salinity and methyl jasmonate stresses. Our results suggest that CarF-box1 encodes an F-box protein and may be involved in various plant developmental processes and abiotic stress responses.

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Year:  2011        PMID: 21667242     DOI: 10.1007/s11033-011-0984-y

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  47 in total

1.  Comparative analysis of ESTs in response to drought stress in chickpea (C. arietinum L.).

Authors:  Wen-Rui Gao; Xian-Sheng Wang; Qing-You Liu; Hui Peng; Chen Chen; Jian-Gui Li; Ju-Song Zhang; Song-Nian Hu; Hao Ma
Journal:  Biochem Biophys Res Commun       Date:  2008-09-17       Impact factor: 3.575

2.  Auxin regulates SCF(TIR1)-dependent degradation of AUX/IAA proteins.

Authors:  W M Gray; S Kepinski; D Rouse; O Leyser; M Estelle
Journal:  Nature       Date:  2001-11-15       Impact factor: 49.962

3.  Patterns of intron loss and gain in plants: intron loss-dominated evolution and genome-wide comparison of O. sativa and A. thaliana.

Authors:  Scott William Roy; David Penny
Journal:  Mol Biol Evol       Date:  2006-10-25       Impact factor: 16.240

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Drosophila kelch motif is derived from a common enzyme fold.

Authors:  P Bork; R F Doolittle
Journal:  J Mol Biol       Date:  1994-03-11       Impact factor: 5.469

6.  FKF1, a clock-controlled gene that regulates the transition to flowering in Arabidopsis.

Authors:  D C Nelson; J Lasswell; L E Rogg; M A Cohen; B Bartel
Journal:  Cell       Date:  2000-04-28       Impact factor: 41.582

7.  SKP1 connects cell cycle regulators to the ubiquitin proteolysis machinery through a novel motif, the F-box.

Authors:  C Bai; P Sen; K Hofmann; L Ma; M Goebl; J W Harper; S J Elledge
Journal:  Cell       Date:  1996-07-26       Impact factor: 41.582

Review 8.  The F-box protein family.

Authors:  E T Kipreos; M Pagano
Journal:  Genome Biol       Date:  2000-11-10       Impact factor: 13.583

9.  The Arabidopsis F-box protein SLEEPY1 targets gibberellin signaling repressors for gibberellin-induced degradation.

Authors:  Alyssa Dill; Stephen G Thomas; Jianhong Hu; Camille M Steber; Tai-Ping Sun
Journal:  Plant Cell       Date:  2004-05-21       Impact factor: 11.277

10.  Molecular phylogeny of the kelch-repeat superfamily reveals an expansion of BTB/kelch proteins in animals.

Authors:  Soren Prag; Josephine C Adams
Journal:  BMC Bioinformatics       Date:  2003-09-17       Impact factor: 3.169

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  11 in total

1.  Identification and comparative analysis of drought-associated microRNAs in two cowpea genotypes.

Authors:  Blanca E Barrera-Figueroa; Lei Gao; Ndeye N Diop; Zhigang Wu; Jeffrey D Ehlers; Philip A Roberts; Timothy J Close; Jian-Kang Zhu; Renyi Liu
Journal:  BMC Plant Biol       Date:  2011-09-17       Impact factor: 4.215

2.  Genome-wide identification, evolutionary and functional analyses of KFB family members in potato.

Authors:  Ruimin Tang; Haitao Dong; Liheng He; Peng Li; Yuanrui Shi; Qing Yang; Xiaoyun Jia; Xiu-Qing Li
Journal:  BMC Plant Biol       Date:  2022-05-02       Impact factor: 5.260

3.  The involvement of wheat F-box protein gene TaFBA1 in the oxidative stress tolerance of plants.

Authors:  Shu-Mei Zhou; Xiang-Zhu Kong; Han-Han Kang; Xiu-Dong Sun; Wei Wang
Journal:  PLoS One       Date:  2015-04-23       Impact factor: 3.240

4.  A new set of ESTs from chickpea (Cicer arietinum L.) embryo reveals two novel F-box genes, CarF-box_PP2 and CarF-box_LysM, with potential roles in seed development.

Authors:  Shefali Gupta; Vanika Garg; Sabhyata Bhatia
Journal:  PLoS One       Date:  2015-03-24       Impact factor: 3.240

5.  The Genome of Microthlaspi erraticum (Brassicaceae) Provides Insights Into the Adaptation to Highly Calcareous Soils.

Authors:  Bagdevi Mishra; Sebastian Ploch; Fabian Runge; Angelika Schmuker; Xiaojuan Xia; Deepak K Gupta; Rahul Sharma; Marco Thines
Journal:  Front Plant Sci       Date:  2020-07-03       Impact factor: 5.753

6.  The molecular signatures of compatible and incompatible pollination in Arabidopsis.

Authors:  Chie Kodera; Jérémy Just; Martine Da Rocha; Antoine Larrieu; Lucie Riglet; Jonathan Legrand; Frédérique Rozier; Thierry Gaude; Isabelle Fobis-Loisy
Journal:  BMC Genomics       Date:  2021-04-14       Impact factor: 3.969

7.  Identification of novel drought-responsive microRNAs and trans-acting siRNAs from Sorghum bicolor (L.) Moench by high-throughput sequencing analysis.

Authors:  Amit Katiyar; Shuchi Smita; Senthilkumar K Muthusamy; Viswanathan Chinnusamy; Dev M Pandey; Kailash C Bansal
Journal:  Front Plant Sci       Date:  2015-07-09       Impact factor: 5.753

8.  A novel F-box protein CaF-box is involved in responses to plant hormones and abiotic stress in pepper (Capsicum annuum L.).

Authors:  Rugang Chen; Weili Guo; Yanxu Yin; Zhen-Hui Gong
Journal:  Int J Mol Sci       Date:  2014-02-10       Impact factor: 5.923

9.  Stress-Inducible Expression of an F-box Gene TaFBA1 from Wheat Enhanced the Drought Tolerance in Transgenic Tobacco Plants without Impacting Growth and Development.

Authors:  Xiangzhu Kong; Shumei Zhou; Suhong Yin; Zhongxian Zhao; Yangyang Han; Wei Wang
Journal:  Front Plant Sci       Date:  2016-09-05       Impact factor: 5.753

Review 10.  Improving Salt Tolerance of Chickpea Using Modern Genomics Tools and Molecular Breeding.

Authors:  Mayank Kaashyap; Rebecca Ford; Abhishek Bohra; Aniket Kuvalekar; Nitin Mantri
Journal:  Curr Genomics       Date:  2017-12       Impact factor: 2.236

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