Literature DB >> 21666064

On the inference of function from structure using biomechanical modelling and simulation of extinct organisms.

John R Hutchinson1.   

Abstract

Biomechanical modelling and simulation techniques offer some hope for unravelling the complex inter-relationships of structure and function perhaps even for extinct organisms, but have their limitations owing to this complexity and the many unknown parameters for fossil taxa. Validation and sensitivity analysis are two indispensable approaches for quantifying the accuracy and reliability of such models or simulations. But there are other subtleties in biomechanical modelling that include investigator judgements about the level of simplicity versus complexity in model design or how uncertainty and subjectivity are dealt with. Furthermore, investigator attitudes toward models encompass a broad spectrum between extreme credulity and nihilism, influencing how modelling is conducted and perceived. Fundamentally, more data and more testing of methodology are required for the field to mature and build confidence in its inferences.

Mesh:

Year:  2011        PMID: 21666064      PMCID: PMC3259946          DOI: 10.1098/rsbl.2011.0399

Source DB:  PubMed          Journal:  Biol Lett        ISSN: 1744-9561            Impact factor:   3.703


  12 in total

1.  Tyrannosaurus was not a fast runner.

Authors:  John R Hutchinson; Mariano Garcia
Journal:  Nature       Date:  2002-02-28       Impact factor: 49.962

2.  Comparative trends in shortening velocity and force production in skeletal muscles.

Authors:  Scott Medler
Journal:  Am J Physiol Regul Integr Comp Physiol       Date:  2002-08       Impact factor: 3.619

3.  A 3D interactive method for estimating body segmental parameters in animals: application to the turning and running performance of Tyrannosaurus rex.

Authors:  John R Hutchinson; Victor Ng-Thow-Hing; Frank C Anderson
Journal:  J Theor Biol       Date:  2007-02-08       Impact factor: 2.691

4.  Estimating dinosaur maximum running speeds using evolutionary robotics.

Authors:  William Irvin Sellers; Phillip Lars Manning
Journal:  Proc Biol Sci       Date:  2007-11-07       Impact factor: 5.349

5.  Verification, validation, and confirmation of numerical models in the Earth sciences.

Authors:  N Oreskes; K Shrader-Frechette; K Belitz
Journal:  Science       Date:  1994-02-04       Impact factor: 47.728

Review 6.  Dinosaur biomechanics.

Authors:  R McNeill Alexander
Journal:  Proc Biol Sci       Date:  2006-08-07       Impact factor: 5.349

7.  Biomechanical modeling and sensitivity analysis of bipedal running ability. II. Extinct taxa.

Authors:  John R Hutchinson
Journal:  J Morphol       Date:  2004-10       Impact factor: 1.804

8.  Variation in center of mass estimates for extant sauropsids and its importance for reconstructing inertial properties of extinct archosaurs.

Authors:  Vivian Allen; Heather Paxton; John R Hutchinson
Journal:  Anat Rec (Hoboken)       Date:  2009-09       Impact factor: 2.064

Review 9.  Biomechanics and muscle coordination of human walking. Part I: introduction to concepts, power transfer, dynamics and simulations.

Authors:  Felix E Zajac; Richard R Neptune; Steven A Kautz
Journal:  Gait Posture       Date:  2002-12       Impact factor: 2.840

Review 10.  The evolutionary continuum of limb function from early theropods to birds.

Authors:  John R Hutchinson; Vivian Allen
Journal:  Naturwissenschaften       Date:  2008-12-24
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  14 in total

1.  Modelling the past: new generation approaches to understanding biological patterns in the fossil record.

Authors:  Andrew B Smith; Paul M Barrett
Journal:  Biol Lett       Date:  2011-11-23       Impact factor: 3.703

2.  Elbow joint adductor moment arm as an indicator of forelimb posture in extinct quadrupedal tetrapods.

Authors:  Shin-ichi Fujiwara; John R Hutchinson
Journal:  Proc Biol Sci       Date:  2012-02-22       Impact factor: 5.349

3.  What makes an accurate and reliable subject-specific finite element model? A case study of an elephant femur.

Authors:  O Panagiotopoulou; S D Wilshin; E J Rayfield; S J Shefelbine; J R Hutchinson
Journal:  J R Soc Interface       Date:  2011-07-13       Impact factor: 4.118

4.  Quantitative inferences on the locomotor behaviour of extinct species applied to Simocyon batalleri (Ailuridae, Late Miocene, Spain).

Authors:  Anne-Claire Fabre; Manuel J Salesa; Raphael Cornette; Mauricio Antón; Jorge Morales; Stéphane Peigné
Journal:  Naturwissenschaften       Date:  2015-05-13

5.  Musculoskeletal modelling of the Nile crocodile (Crocodylus niloticus) hindlimb: Effects of limb posture on leverage during terrestrial locomotion.

Authors:  Ashleigh L A Wiseman; Peter J Bishop; Oliver E Demuth; Andrew R Cuff; Krijn B Michel; John R Hutchinson
Journal:  J Anat       Date:  2021-03-23       Impact factor: 2.610

6.  Comparative finite-element analysis: a single computational modelling method can estimate the mechanical properties of porcine and human vertebrae.

Authors:  K Robson Brown; S Tarsuslugil; V N Wijayathunga; R K Wilcox
Journal:  J R Soc Interface       Date:  2014-04-09       Impact factor: 4.118

7.  Morphological and functional changes in the vertebral column with increasing aquatic adaptation in crocodylomorphs.

Authors:  Julia L Molnar; Stephanie E Pierce; Bhart-Anjan S Bhullar; Alan H Turner; John R Hutchinson
Journal:  R Soc Open Sci       Date:  2015-11-04       Impact factor: 2.963

8.  Tetrapod-like pelvic girdle in a walking cavefish.

Authors:  Brooke E Flammang; Apinun Suvarnaraksha; Julie Markiewicz; Daphne Soares
Journal:  Sci Rep       Date:  2016-03-24       Impact factor: 4.379

9.  Comments and corrections on 3D modeling studies of locomotor muscle moment arms in archosaurs.

Authors:  Karl Bates; Susannah C R Maidment; Emma R Schachner; Paul M Barrett
Journal:  PeerJ       Date:  2015-10-08       Impact factor: 2.984

10.  Shape Covariation (or the Lack Thereof) Between Vertebrae and Other Skeletal Traits in Felids: The Whole is Not Always Greater than the Sum of Parts.

Authors:  Marcela Randau; Anjali Goswami
Journal:  Evol Biol       Date:  2018-01-10       Impact factor: 3.119

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