Literature DB >> 21665695

Discordance of chloroplast and nuclear ribosomal DNA data in Osmorhiza (Apiaceae).

Ki-Oug Yoo1, Porter P Lowry Ii, Jun Wen.   

Abstract

Phylogenetic studies were conducted to evaluate interspecific relationships in Osmorhiza (Apiaceae: Apioideae) using sequences of the ITS regions of nuclear ribosomal DNA, the chloroplast ndhF gene, and two noncoding regions (trnL intron, and trnL [UAA] 3' exon-trnF [GAA] intergenic spacer). All data sets suggest the monophyly of the New World taxa and showed that Osmorhiza aristata from Asia is relatively divergent from other members of the genus, even though it is morphologically similar to the eastern North American O. claytonii and O. longistylis. The ITS and chloroplast DNA trees differ in the relationships among the New World taxa, especially the phylogenetic position of O. occidentalis, O. glabrata, and O. depauperata. The lack of congruence between the two data sets may be a result of hybridization or introgression. Although there is high discordance between nrITS and two chloroplast DNA data sets, the latter two show similar topologies.

Entities:  

Year:  2002        PMID: 21665695     DOI: 10.3732/ajb.89.6.966

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  3 in total

1.  Phylogeny and classification of Paris (Melanthiaceae) inferred from DNA sequence data.

Authors:  Yunheng Ji; Peter W Fritsch; Heng Li; Tiaojiang Xiao; Zhekun Zhou
Journal:  Ann Bot       Date:  2006-05-16       Impact factor: 4.357

2.  Speciation process of Salvia isensis (Lamiaceae), a species endemic to serpentine areas in the Ise-Tokai district, Japan, from the viewpoint of the contradictory phylogenetic trees generated from chloroplast and nuclear DNA.

Authors:  Hiroshi Okada
Journal:  J Plant Res       Date:  2007-05-17       Impact factor: 3.000

3.  Incongruence between nuclear and chloroplast DNA phylogenies in pedicularis section Cyathophora (Orobanchaceae).

Authors:  Wen-Bin Yu; Pan-Hui Huang; De-Zhu Li; Hong Wang
Journal:  PLoS One       Date:  2013-09-19       Impact factor: 3.240

  3 in total

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