Literature DB >> 21664934

Flow detection of propagating waves with temporospatial correlation of activity.

Kentaroh Takagaki1, Chuan Zhang, Jian-Young Wu, Frank W Ohl.   

Abstract

Voltage-sensitive dye imaging (VSDI) allows population patterns of cortical activity to be recorded with high temporal resolution, and recent findings ascribe potential significance to these spatial propagation patterns--both for normal cortical processing and in pathologies such as epilepsy. However, analysis of these spatiotemporal patterns has been mostly qualitative to date. In this report, we describe an algorithm to quantify fast local flow patterns of cortical population activation, as measured with VSDI. The algorithm uses correlation of temporal features across space, and therefore differs from conventional optical flow algorithms which use correlation of spatial features over time. This alternative approach allows us to take advantage of the characteristics of fast optical imaging data, which have very high temporal resolution but less spatial resolution. We verify the method both on artificial and biological data, and demonstrate its use.
Copyright © 2011 Elsevier B.V. All rights reserved.

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Year:  2011        PMID: 21664934      PMCID: PMC3179389          DOI: 10.1016/j.jneumeth.2011.05.023

Source DB:  PubMed          Journal:  J Neurosci Methods        ISSN: 0165-0270            Impact factor:   2.390


  38 in total

1.  Direct evidence for local oscillatory current sources and intracortical phase gradients in turtle visual cortex.

Authors:  J C Prechtl; T H Bullock; D Kleinfeld
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-18       Impact factor: 11.205

2.  Voltage-sensitive dye imaging of population neuronal activity in cortical tissue.

Authors:  Wenjun Jin; Ren-Ji Zhang; Jian-young Wu
Journal:  J Neurosci Methods       Date:  2002-03-30       Impact factor: 2.390

3.  Functionally independent columns of rat somatosensory barrel cortex revealed with voltage-sensitive dye imaging.

Authors:  C C Petersen; B Sakmann
Journal:  J Neurosci       Date:  2001-11-01       Impact factor: 6.167

4.  Imaging spatiotemporal dynamics of surround inhibition in the barrels somatosensory cortex.

Authors:  Dori Derdikman; Rina Hildesheim; Ehud Ahissar; Amos Arieli; Amiram Grinvald
Journal:  J Neurosci       Date:  2003-04-15       Impact factor: 6.167

Review 5.  VSDI: a new era in functional imaging of cortical dynamics.

Authors:  Amiram Grinvald; Rina Hildesheim
Journal:  Nat Rev Neurosci       Date:  2004-11       Impact factor: 34.870

6.  Spiral waves in disinhibited mammalian neocortex.

Authors:  Xiaoying Huang; William C Troy; Qian Yang; Hongtao Ma; Carlo R Laing; Steven J Schiff; Jian-Young Wu
Journal:  J Neurosci       Date:  2004-11-03       Impact factor: 6.167

7.  Developmental changes in trial-to-trial variations in whisker barrel responses studied using intrinsic optical imaging: comparison between normal and de-whiskered rats.

Authors:  I Yazawa; S Sasaki; H Mochida; K Kamino; Y Momose-Sato; K Sato
Journal:  J Neurophysiol       Date:  2001-07       Impact factor: 2.714

8.  Spatiotemporal patterns of an evoked network oscillation in neocortical slices: coupled local oscillators.

Authors:  Li Bai; Xiaoying Huang; Qian Yang; Jian-Young Wu
Journal:  J Neurophysiol       Date:  2006-07-26       Impact factor: 2.714

Review 9.  Imaging ventricular fibrillation.

Authors:  Guy Salama; Bum-Rak Choi
Journal:  J Electrocardiol       Date:  2007 Nov-Dec       Impact factor: 1.438

10.  Normalization of voltage-sensitive dye signal with functional activity measures.

Authors:  Kentaroh Takagaki; Michael Thomas Lippert; Benjamin Dann; Tim Wanger; Frank W Ohl
Journal:  PLoS One       Date:  2008-12-24       Impact factor: 3.240

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  10 in total

1.  In vivo imaging of epileptic activity using 2-NBDG, a fluorescent deoxyglucose analog.

Authors:  Vassiliy Tsytsarev; Konstantin I Maslov; Junjie Yao; Archana R Parameswar; Alexei V Demchenko; Lihong V Wang
Journal:  J Neurosci Methods       Date:  2011-09-14       Impact factor: 2.390

2.  Spontaneous cortical activity alternates between motifs defined by regional axonal projections.

Authors:  Majid H Mohajerani; Allen W Chan; Mostafa Mohsenvand; Jeffrey LeDue; Rui Liu; David A McVea; Jamie D Boyd; Yu Tian Wang; Mark Reimers; Timothy H Murphy
Journal:  Nat Neurosci       Date:  2013-08-25       Impact factor: 24.884

Review 3.  Catching the voltage gradient-asymmetric boost of cortical spread generates motion signals across visual cortex: a brief review with special thanks to Amiram Grinvald.

Authors:  Dirk Jancke
Journal:  Neurophotonics       Date:  2017-02-10       Impact factor: 3.593

4.  Stimulus-entrained oscillatory activity propagates as waves from area 18 to 17 in cat visual cortex.

Authors:  Lian Zheng; Haishan Yao
Journal:  PLoS One       Date:  2012-07-25       Impact factor: 3.240

5.  Wave propagation of cortical population activity under urethane anesthesia is state dependent.

Authors:  Tim Wanger; Kentaroh Takagaki; Michael T Lippert; Jürgen Goldschmidt; Frank W Ohl
Journal:  BMC Neurosci       Date:  2013-07-31       Impact factor: 3.288

6.  Improving voltage-sensitive dye imaging: with a little help from computational approaches.

Authors:  Sandrine Chemla; Lyle Muller; Alexandre Reynaud; Sylvain Takerkart; Alain Destexhe; Frédéric Chavane
Journal:  Neurophotonics       Date:  2017-05-19       Impact factor: 3.593

7.  High-performance, inexpensive setup for simultaneous multisite recording of electrophysiological signals and mesoscale voltage imaging in the mouse cortex.

Authors:  Edgar Bermudez-Contreras; Sergey Chekhov; Jianjun Sun; Jennifer Tarnowsky; Bruce L McNaughton; Majid H Mohajerani
Journal:  Neurophotonics       Date:  2018-03-29       Impact factor: 3.593

8.  Detection and analysis of spatiotemporal patterns in brain activity.

Authors:  Rory G Townsend; Pulin Gong
Journal:  PLoS Comput Biol       Date:  2018-12-03       Impact factor: 4.475

9.  Cortex-wide dynamics of intrinsic electrical activities: propagating waves and their interactions.

Authors:  Yuqi Liang; Chenchen Song; Mianxin Liu; Pulin Gong; Changsong Zhou; Thomas Knöpfel
Journal:  J Neurosci       Date:  2021-03-16       Impact factor: 6.167

10.  The stimulus-evoked population response in visual cortex of awake monkey is a propagating wave.

Authors:  Lyle Muller; Alexandre Reynaud; Frédéric Chavane; Alain Destexhe
Journal:  Nat Commun       Date:  2014-04-28       Impact factor: 14.919

  10 in total

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