Literature DB >> 2166168

Chromatin reconstitution on small DNA rings. III. Histone H5 dependence of DNA supercoiling in the nucleosome.

Y Zivanovic1, I Duband-Goulet, P Schultz, E Stofer, P Oudet, A Prunell.   

Abstract

Mononucleosomes were reconstituted on small DNA rings in the presence of histone H5 and relaxed to an equilibrium using calf thymus topoisomerase I. DNA products, when compared to the equilibria observed with the same minicircles in the absence of histones, showed that a linking number reduction of 1.6 to 1.7 was associated with this reconstitution, in contrast with the 1.1 to 1.2 figure reported in our recent study of the H5-free nucleosome. Gel electrophoretic properties and electron microscopic visualization of the nucleosomes suggest a correlation between this increase and a further wrapping of the DNA around the histone core from less than 1.5 turns of the superhelix in the absence of H5, to close to two turns in its presence. Implications for DNA topology in chromatin are discussed.

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Year:  1990        PMID: 2166168     DOI: 10.1016/0022-2836(90)90195-R

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  17 in total

1.  Molecular modeling of the chromatosome particle.

Authors:  M M Srinivas Bharath; Nagasuma R Chandra; M R S Rao
Journal:  Nucleic Acids Res       Date:  2003-07-15       Impact factor: 16.971

2.  Fast, long-range, reversible conformational fluctuations in nucleosomes revealed by single-pair fluorescence resonance energy transfer.

Authors:  Miroslav Tomschik; Haocheng Zheng; Ken van Holde; Jordanka Zlatanova; Sanford H Leuba
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-22       Impact factor: 11.205

Review 3.  Expedient placement of two fluorescent dyes for investigating dynamic DNA protein interactions in real time.

Authors:  Sanford H Leuba; Syam P Anand; Joel M Harp; Saleem A Khan
Journal:  Chromosome Res       Date:  2008       Impact factor: 5.239

4.  Interaction of the histone (H3-H4)2 tetramer of the nucleosome with positively supercoiled DNA minicircles: Potential flipping of the protein from a left- to a right-handed superhelical form.

Authors:  A Hamiche; V Carot; M Alilat; F De Lucia; M F O'Donohue; B Revet; A Prunell
Journal:  Proc Natl Acad Sci U S A       Date:  1996-07-23       Impact factor: 11.205

5.  Modeling chain folding in protein-constrained circular DNA.

Authors:  J A Martino; W K Olson
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

6.  Chromatin fiber structure: morphology, molecular determinants, structural transitions.

Authors:  J Zlatanova; S H Leuba; K van Holde
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

7.  A topological approach to nucleosome structure and dynamics: the linking number paradox and other issues.

Authors:  A Prunell
Journal:  Biophys J       Date:  1998-05       Impact factor: 4.033

Review 8.  The regulatory role of DNA supercoiling in nucleoprotein complex assembly and genetic activity.

Authors:  Georgi Muskhelishvili; Andrew Travers
Journal:  Biophys Rev       Date:  2016-11-19

9.  A chromatin folding model that incorporates linker variability generates fibers resembling the native structures.

Authors:  C L Woodcock; S A Grigoryev; R A Horowitz; N Whitaker
Journal:  Proc Natl Acad Sci U S A       Date:  1993-10-01       Impact factor: 11.205

10.  Octamer displacement and redistribution in transcription of single nucleosomes.

Authors:  M F O'Donohue; I Duband-Goulet; A Hamiche; A Prunell
Journal:  Nucleic Acids Res       Date:  1994-03-25       Impact factor: 16.971

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