Literature DB >> 21660059

Crystal structure of the N-terminal region of human Ash2L shows a winged-helix motif involved in DNA binding.

Yong Chen1, Bingbing Wan, Kevin C Wang, Fang Cao, Yuting Yang, Angeline Protacio, Yali Dou, Howard Y Chang, Ming Lei.   

Abstract

Ash2L is a core component of the MLL family histone methyltransferases and has an important role in regulating the methylation of histone H3 on lysine 4. Here, we report the crystal structure of the N-terminal domain of Ash2L and reveal a new function of Ash2L. The structure shows that Ash2L contains an atypical PHD finger that does not have histone tail-binding activity. Unexpectedly, the structure shows a previously unrecognized winged-helix motif that directly binds to DNA. The DNA-binding-deficient mutants of Ash2L reduced Ash2L localization to the HOX locus. Strikingly, a single mutation in Ash2L(WH) (K131A) breaks the chromatin domain boundary, suggesting that Ash2L also has a role in chromosome demarcation.

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Year:  2011        PMID: 21660059      PMCID: PMC3147254          DOI: 10.1038/embor.2011.101

Source DB:  PubMed          Journal:  EMBO Rep        ISSN: 1469-221X            Impact factor:   8.807


  17 in total

1.  Unified nomenclature for the winged helix/forkhead transcription factors.

Authors:  K H Kaestner; W Knochel; D E Martinez
Journal:  Genes Dev       Date:  2000-01-15       Impact factor: 11.361

2.  Automated structure solution with autoSHARP.

Authors:  Clemens Vonrhein; Eric Blanc; Pietro Roversi; Gérard Bricogne
Journal:  Methods Mol Biol       Date:  2007

3.  Functional demarcation of active and silent chromatin domains in human HOX loci by noncoding RNAs.

Authors:  John L Rinn; Michael Kertesz; Jordon K Wang; Sharon L Squazzo; Xiao Xu; Samantha A Brugmann; L Henry Goodnough; Jill A Helms; Peggy J Farnham; Eran Segal; Howard Y Chang
Journal:  Cell       Date:  2007-06-29       Impact factor: 41.582

4.  Version 1.2 of the Crystallography and NMR system.

Authors:  Axel T Brunger
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

5.  Histone H3 lysine 4 methylation is mediated by Set1 and required for cell growth and rDNA silencing in Saccharomyces cerevisiae.

Authors:  S D Briggs; M Bryk; B D Strahl; W L Cheung; J K Davie; S Y Dent; F Winston; C D Allis
Journal:  Genes Dev       Date:  2001-12-15       Impact factor: 11.361

6.  Regulation of MLL1 H3K4 methyltransferase activity by its core components.

Authors:  Yali Dou; Thomas A Milne; Alexander J Ruthenburg; Seunghee Lee; Jae Woon Lee; Gregory L Verdine; C David Allis; Robert G Roeder
Journal:  Nat Struct Mol Biol       Date:  2006-07-30       Impact factor: 15.369

Review 7.  Methylation of lysine 4 on histone H3: intricacy of writing and reading a single epigenetic mark.

Authors:  Alexander J Ruthenburg; C David Allis; Joanna Wysocka
Journal:  Mol Cell       Date:  2007-01-12       Impact factor: 17.970

8.  Cloning and characterization of ASH2L and Ash2l, human and mouse homologs of the Drosophila ash2 gene.

Authors:  S Ikegawa; M Isomura; Y Koshizuka; Y Nakamura
Journal:  Cytogenet Cell Genet       Date:  1999

9.  A long noncoding RNA maintains active chromatin to coordinate homeotic gene expression.

Authors:  Kevin C Wang; Yul W Yang; Bo Liu; Amartya Sanyal; Ryan Corces-Zimmerman; Yong Chen; Bryan R Lajoie; Angeline Protacio; Ryan A Flynn; Rajnish A Gupta; Joanna Wysocka; Ming Lei; Job Dekker; Jill A Helms; Howard Y Chang
Journal:  Nature       Date:  2011-03-20       Impact factor: 49.962

Review 10.  The PHD finger, a nuclear protein-interaction domain.

Authors:  Mariann Bienz
Journal:  Trends Biochem Sci       Date:  2005-11-16       Impact factor: 13.807

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  28 in total

1.  A non-active-site SET domain surface crucial for the interaction of MLL1 and the RbBP5/Ash2L heterodimer within MLL family core complexes.

Authors:  Stephen A Shinsky; Michael Hu; Valarie E Vought; Sarah B Ng; Michael J Bamshad; Jay Shendure; Michael S Cosgrove
Journal:  J Mol Biol       Date:  2014-03-27       Impact factor: 5.469

Review 2.  SET for life: biochemical activities and biological functions of SET domain-containing proteins.

Authors:  Hans-Martin Herz; Alexander Garruss; Ali Shilatifard
Journal:  Trends Biochem Sci       Date:  2013-10-20       Impact factor: 13.807

Review 3.  Hijacked in cancer: the KMT2 (MLL) family of methyltransferases.

Authors:  Rajesh C Rao; Yali Dou
Journal:  Nat Rev Cancer       Date:  2015-06       Impact factor: 60.716

4.  Low expression of ASH2L protein correlates with a favorable outcome in acute myeloid leukemia.

Authors:  Jill S Butler; Yi Hua Qiu; Nianxiang Zhang; Suk-Young Yoo; Kevin R Coombes; Sharon Y R Dent; Steven M Kornblau
Journal:  Leuk Lymphoma       Date:  2016-10-13

5.  The trithorax group protein Ash2l is essential for pluripotency and maintaining open chromatin in embryonic stem cells.

Authors:  Ma Wan; Jiancong Liang; Yuanyan Xiong; Fengtao Shi; Yi Zhang; Weisi Lu; Quanyuan He; Dong Yang; Rui Chen; Dan Liu; Michelle Barton; Zhou Songyang
Journal:  J Biol Chem       Date:  2012-12-13       Impact factor: 5.157

6.  Absent, small or homeotic 2-like protein (ASH2L) enhances the transcription of the estrogen receptor α gene through GATA-binding protein 3 (GATA3).

Authors:  Jin Qi; Lei Huo; Yiwei Tony Zhu; Yi-Jun Zhu
Journal:  J Biol Chem       Date:  2014-09-25       Impact factor: 5.157

Review 7.  Active chromatin and noncoding RNAs: an intimate relationship.

Authors:  Ryan A Flynn; Howard Y Chang
Journal:  Curr Opin Genet Dev       Date:  2011-12-07       Impact factor: 5.578

Review 8.  The complex activities of the SET1/MLL complex core subunits in development and disease.

Authors:  Hao Jiang
Journal:  Biochim Biophys Acta Gene Regul Mech       Date:  2020-04-15       Impact factor: 4.490

Review 9.  Substrate and product specificities of SET domain methyltransferases.

Authors:  Paul A Del Rizzo; Raymond C Trievel
Journal:  Epigenetics       Date:  2011-09-01       Impact factor: 4.528

10.  ASH2L regulates ubiquitylation signaling to MLL: trans-regulation of H3 K4 methylation in higher eukaryotes.

Authors:  Lipeng Wu; Shirley Y Lee; Bo Zhou; Uyen T T Nguyen; Tom W Muir; Song Tan; Yali Dou
Journal:  Mol Cell       Date:  2013-02-28       Impact factor: 17.970

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