Literature DB >> 21656375

Concepts in projection-reconstruction.

Ray Freeman1, Ēriks Kupče.   

Abstract

The Achilles heel of conventional multidimensional NMR spectroscopy is the long duration of the measurements, set by the Nyquist sampling condition and the resolution requirements in the evolution dimensions. Projection-reconstruction solves this problem by radial sampling of the evolution-domain signals, relying on Bracewell's Fourier transform slice/projection theorem to generate a set of projections at different inclinations. Reconstruction is implemented by one of three possible deterministic back-projection schemes (additive, lowest-value, or algebraic), or by a statistical model-fitting program. For simplicity the treatment focuses principally on the three-dimensional case, and then extends the analysis to four dimensions. The concept of hyperdimensional spectroscopy is described for dealing with even higher dimensions.

Mesh:

Year:  2012        PMID: 21656375     DOI: 10.1007/128_2010_103

Source DB:  PubMed          Journal:  Top Curr Chem        ISSN: 0340-1022


  8 in total

1.  TSAR: a program for automatic resonance assignment using 2D cross-sections of high dimensionality, high-resolution spectra.

Authors:  Anna Zawadzka-Kazimierczuk; Wiktor Koźmiński; Martin Billeter
Journal:  J Biomol NMR       Date:  2012-07-18       Impact factor: 2.835

2.  Parallel acquisition of multi-dimensional spectra in protein NMR.

Authors:  Eriks Kupče; Lewis E Kay
Journal:  J Biomol NMR       Date:  2012-07-17       Impact factor: 2.835

3.  (13)C-detected NMR experiments for automatic resonance assignment of IDPs and multiple-fixing SMFT processing.

Authors:  Paweł Dziekański; Katarzyna Grudziąż; Patrik Jarvoll; Wiktor Koźmiński; Anna Zawadzka-Kazimierczuk
Journal:  J Biomol NMR       Date:  2015-04-23       Impact factor: 2.835

4.  Amino acid recognition for automatic resonance assignment of intrinsically disordered proteins.

Authors:  Alessandro Piai; Leonardo Gonnelli; Isabella C Felli; Roberta Pierattelli; Krzysztof Kazimierczuk; Katarzyna Grudziąż; Wiktor Koźmiński; Anna Zawadzka-Kazimierczuk
Journal:  J Biomol NMR       Date:  2016-02-18       Impact factor: 2.835

5.  Five and four dimensional experiments for robust backbone resonance assignment of large intrinsically disordered proteins: application to Tau3x protein.

Authors:  Szymon Żerko; Piotr Byrski; Paweł Włodarczyk-Pruszyński; Michał Górka; Karin Ledolter; Eliezer Masliah; Robert Konrat; Wiktor Koźmiński
Journal:  J Biomol NMR       Date:  2016-07-18       Impact factor: 2.835

6.  Reconstruction of non-uniformly sampled five-dimensional NMR spectra by signal separation algorithm.

Authors:  Krzysztof Kosiński; Jan Stanek; Michał J Górka; Szymon Żerko; Wiktor Koźmiński
Journal:  J Biomol NMR       Date:  2017-02-28       Impact factor: 2.835

7.  Improving the sensitivity of FT-NMR spectroscopy by apodization weighted sampling.

Authors:  Bernd Simon; Herbert Köstler
Journal:  J Biomol NMR       Date:  2019-05-02       Impact factor: 2.835

8.  Unbiased measurements of reconstruction fidelity of sparsely sampled magnetic resonance spectra.

Authors:  Qinglin Wu; Brian E Coggins; Pei Zhou
Journal:  Nat Commun       Date:  2016-07-27       Impact factor: 14.919

  8 in total

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