Literature DB >> 21644597

Theoretical Justification of Wavelength Selection in PLS Calibration:  Development of a New Algorithm.

C H Spiegelman1, M J McShane, M J Goetz, M Motamedi, Q L Yue, G L Coté.   

Abstract

The mathematical basis of improved calibration through selection of informative variables for partial least-squares calibration has been identified. A theoretical investigation of calibration slopes indicates that including uninformative wavelengths negatively affect calibrations by producing both large relative bias toward zero and small additive bias away from the origin. These theoretical results are found regardless of the noise distribution in the data. Studies are performed to confirm this result using a previously used selection method compared to a new method, which is designed to perform more appropriately when dealing with data having large outlying points by including estimates of spectral residuals. Three different data sets are tested with varying noise distributions. In the first data set, Gaussian and log-normal noise was added to simulated data which included a single peak. Second, near-infrared spectra of glucose in cell culture media taken with an FT-IR spectrometer were analyzed. Finally, dispersive Raman Stokes spectra of glucose dissolved in water were assessed. In every case considered here, improved prediction is produced through selection, but data with different noise characteristics showed varying degrees of improvement depending on the selection method used. The practical results showed that, indeed, including residuals into ranking criteria improves selection for data with noise distributions resulting in large outliers. It was concluded that careful design of a selection algorithm should include consideration of spectral noise distributions in the input data to increase the likelihood of successful and appropriate selection.

Entities:  

Year:  1998        PMID: 21644597     DOI: 10.1021/ac9705733

Source DB:  PubMed          Journal:  Anal Chem        ISSN: 0003-2700            Impact factor:   6.986


  8 in total

1.  Wavelength selection-based nonlinear calibration for transcutaneous blood glucose sensing using Raman spectroscopy.

Authors:  Narahara Chari Dingari; Ishan Barman; Jeon Woong Kang; Chae-Ryon Kong; Ramachandra R Dasari; Michael S Feld
Journal:  J Biomed Opt       Date:  2011-08       Impact factor: 3.170

2.  Incorporation of support vector machines in the LIBS toolbox for sensitive and robust classification amidst unexpected sample and system variability.

Authors:  Narahara Chari Dingari; Ishan Barman; Ashwin Kumar Myakalwar; Surya P Tewari; Manoj Kumar Gundawar
Journal:  Anal Chem       Date:  2012-03-02       Impact factor: 6.986

3.  An efficient variable selection method based on random frog for the multivariate calibration of NIR spectra.

Authors:  Jingjing Sun; Wude Yang; Meichen Feng; Qifang Liu; Muhammad Saleem Kubar
Journal:  RSC Adv       Date:  2020-04-23       Impact factor: 4.036

4.  A Partial Least Squares based algorithm for parsimonious variable selection.

Authors:  Tahir Mehmood; Harald Martens; Solve Sæbø; Jonas Warringer; Lars Snipen
Journal:  Algorithms Mol Biol       Date:  2011-12-05       Impact factor: 1.405

5.  High-Throughput Phenotyping Approach for Screening Major Carotenoids of Tomato by Handheld Raman Spectroscopy Using Chemometric Methods.

Authors:  Hacer Akpolat; Mark Barineau; Keith A Jackson; Mehmet Z Akpolat; David M Francis; Yu-Ju Chen; Luis E Rodriguez-Saona
Journal:  Sensors (Basel)       Date:  2020-07-03       Impact factor: 3.576

6.  Comparison of wavelength selection methods for in-vitro estimation of lactate: a new unconstrained, genetic algorithm-based wavelength selection.

Authors:  Mohammad Mamouei; Karthik Budidha; Nystha Baishya; Meha Qassem; Panayiotis Kyriacou
Journal:  Sci Rep       Date:  2020-10-09       Impact factor: 4.379

7.  Determination of Bio-Based Fertilizer Composition Using Combined NIR and MIR Spectroscopy: A Model Averaging Approach.

Authors:  Khan Wali; Haris Ahmad Khan; Mark Farrell; Eldert J Van Henten; Erik Meers
Journal:  Sensors (Basel)       Date:  2022-08-08       Impact factor: 3.847

8.  [Not Available].

Authors:  Xiao-Ping Yu; Lu Xu; Ru-Qin Yu
Journal:  J Autom Methods Manag Chem       Date:  2009-06-11
  8 in total

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