Literature DB >> 21642468

Complete genome sequence of the anaerobic, halophilic alkalithermophile Natranaerobius thermophilus JW/NM-WN-LF.

Baisuo Zhao1, Noha M Mesbah, Eileen Dalin, Lynne Goodwin, Matt Nolan, Sam Pitluck, Olga Chertkov, Thomas S Brettin, James Han, Frank W Larimer, Miriam L Land, Loren Hauser, Nikolaos Kyrpides, Juergen Wiegel.   

Abstract

The genome of the anaerobic halophilic alkalithermophile Natranaerobius thermophilus consists of one 3,165,557-bp chromosome and two plasmids (17,207 bp and 8,689 bp). The present study is the first to report the completely sequenced genome of an anaerobic polyextremophile and genes associated with roles in regulation of intracellular osmotic pressure, pH homeostasis, and growth at elevated temperatures.

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Year:  2011        PMID： 21642468      PMCID： PMC3147539          DOI： 10.1128/JB.05157-11

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  7 in total

1.  GenePRIMP: a gene prediction improvement pipeline for prokaryotic genomes.

Authors:  Amrita Pati; Natalia N Ivanova; Natalia Mikhailova; Galina Ovchinnikova; Sean D Hooper; Athanasios Lykidis; Nikos C Kyrpides
Journal:  Nat Methods       Date:  2010-05-02       Impact factor: 28.547

Review 2.  Anaerobic alkalithermophiles, a novel group of extremophiles.

Authors:  J Wiegel
Journal:  Extremophiles       Date:  1998-08       Impact factor: 2.395

3.  Prodigal: prokaryotic gene recognition and translation initiation site identification.

Authors:  Doug Hyatt; Gwo-Liang Chen; Philip F Locascio; Miriam L Land; Frank W Larimer; Loren J Hauser
Journal:  BMC Bioinformatics       Date:  2010-03-08       Impact factor: 3.169

4.  The genome sequence of the psychrophilic archaeon, Methanococcoides burtonii: the role of genome evolution in cold adaptation.

Authors:  Michelle A Allen; Federico M Lauro; Timothy J Williams; Dominic Burg; Khawar S Siddiqui; Davide De Francisci; Kevin W Y Chong; Oliver Pilak; Hwee H Chew; Matthew Z De Maere; Lily Ting; Marilyn Katrib; Charmaine Ng; Kevin R Sowers; Michael Y Galperin; Iain J Anderson; Natalia Ivanova; Eileen Dalin; Michele Martinez; Alla Lapidus; Loren Hauser; Miriam Land; Torsten Thomas; Ricardo Cavicchioli
Journal:  ISME J       Date:  2009-04-30       Impact factor: 10.302

5.  Natranaerobius thermophilus gen. nov., sp. nov., a halophilic, alkalithermophilic bacterium from soda lakes of the Wadi An Natrun, Egypt, and proposal of Natranaerobiaceae fam. nov. and Natranaerobiales ord. nov.

Authors:  Noha M Mesbah; David B Hedrick; Aaron D Peacock; Manfred Rohde; Juergen Wiegel
Journal:  Int J Syst Evol Microbiol       Date:  2007-11       Impact factor: 2.747

6.  Cation/proton antiporter complements of bacteria: why so large and diverse?

Authors:  Terry A Krulwich; David B Hicks; Masahiro Ito
Journal:  Mol Microbiol       Date:  2009-08-11       Impact factor: 3.501

7.  The halophilic alkalithermophile Natranaerobius thermophilus adapts to multiple environmental extremes using a large repertoire of Na(K)/H antiporters.

Authors:  Noha M Mesbah; Gregory M Cook; Juergen Wiegel
Journal:  Mol Microbiol       Date:  2009-08-24       Impact factor: 3.501
  7 in total
  10 in total

Review 1.  Life under multiple extreme conditions: diversity and physiology of the halophilic alkalithermophiles.

Authors:  Noha M Mesbah; Juergen Wiegel
Journal:  Appl Environ Microbiol       Date:  2012-04-06       Impact factor: 4.792

2.  Unusual metabolic diversity of hyperalkaliphilic microbial communities associated with subterranean serpentinization at The Cedars.

Authors:  Shino Suzuki; Shun'ichi Ishii; Tatsuhiko Hoshino; Amanda Rietze; Aaron Tenney; Penny L Morrill; Fumio Inagaki; J Gijs Kuenen; Kenneth H Nealson
Journal:  ISME J       Date:  2017-07-21       Impact factor: 10.302

3.  Genome Diversity of Spore-Forming Firmicutes.

Authors:  Michael Y Galperin
Journal:  Microbiol Spectr       Date:  2013-12

4.  Differences in Physical and Biochemical Properties of Thermus scotoductus SA-01 Cultured with Dielectric or Convection Heating.

Authors:  Allison L Cockrell; Lisa A Fitzgerald; Kathleen D Cusick; Daniel E Barlow; Stanislav D Tsoi; Carissa M Soto; Jeffrey W Baldwin; Jason R Dale; Robert E Morris; Brenda J Little; Justin C Biffinger
Journal:  Appl Environ Microbiol       Date:  2015-07-06       Impact factor: 4.792

5.  Acid-shifted isoelectric point profiles of the proteins in a hypersaline microbial mat: an adaptation to life at high salt concentrations?

Authors:  Rahel Elevi Bardavid; Aharon Oren
Journal:  Extremophiles       Date:  2012-08-21       Impact factor: 2.395

6.  A genomic signature and the identification of new sporulation genes.

Authors:  Ana B Abecasis; Mónica Serrano; Renato Alves; Leonor Quintais; José B Pereira-Leal; Adriano O Henriques
Journal:  J Bacteriol       Date:  2013-02-08       Impact factor: 3.490

Review 7.  Life at high salt concentrations, intracellular KCl concentrations, and acidic proteomes.

Authors:  Aharon Oren
Journal:  Front Microbiol       Date:  2013-11-05       Impact factor: 5.640

8.  Salty sisters: The women of halophiles.

Authors:  Bonnie K Baxter; Nina Gunde-Cimerman; Aharon Oren
Journal:  Front Microbiol       Date:  2014-06-04       Impact factor: 5.640

9.  Draft genome sequence of Dethiobacter alkaliphilus strain AHT1T, a gram-positive sulfidogenic polyextremophile.

Authors:  Emily Denise Melton; Dimitry Y Sorokin; Lex Overmars; Alla L Lapidus; Manoj Pillay; Natalia Ivanova; Tijana Glavina Del Rio; Nikos C Kyrpides; Tanja Woyke; Gerard Muyzer
Journal:  Stand Genomic Sci       Date:  2017-09-21

10.  Genomic determinants of sporulation in Bacilli and Clostridia: towards the minimal set of sporulation-specific genes.

Authors:  Michael Y Galperin; Sergei L Mekhedov; Pere Puigbo; Sergey Smirnov; Yuri I Wolf; Daniel J Rigden
Journal:  Environ Microbiol       Date:  2012-08-13       Impact factor: 5.491
  10 in total

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