Literature DB >> 21642181

The utility of automated analysis of inter-simple sequence repeat (ISSR) loci for resolving relationships in the Canary Island species of Tolpis (Asteraceae).

Jenny K Archibald1, Daniel J Crawford, Arnoldo Santos-Guerra, Mark E Mort.   

Abstract

Plants of oceanic islands, often remarkably divergent morphologically from continental relatives, are useful models for studying evolution and speciation because evolution is telescoped in time and space. Prior studies revealed little DNA sequence variation within the clade of ca. 10 Canary Island species of Tolpis, which precluded resolving species relationships. The present study assessed the utility of automated analysis of inter-simple sequence repeat (ISSR) loci for resolving relationships within the clade using 264 individuals from 36 populations of all recognized species and three undescribed morphological variants. Similarity (Dice coefficient) and Fitch parsimony were used to generate neighbor-joining (NJ) and strict consensus trees (MP), respectively. All individuals of the morphologically distinct endemic species formed clusters in both trees. There is also support for clusters of two undescribed variants in the NJ tree. Individuals from a morphologically variable complex consisting primarily of two species are not well resolved at population or species levels. The NJ and MP trees are not congruent at deeper levels, including relationships among species. Results are interpreted in terms of the biology of the species, and the utility of automated analysis of ISSR markers for interpreting patterns of evolution of Tolpis in the Canary Islands is discussed.

Entities:  

Year:  2006        PMID: 21642181     DOI: 10.3732/ajb.93.8.1154

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  6 in total

1.  Inter-Simple Sequence Repeats (ISSR), Microsatellite-Primed Genomic Profiling Using Universal Primers.

Authors:  Chrissen E C Gemmill; Ella R P Grierson
Journal:  Methods Mol Biol       Date:  2021

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3.  The genetic breakdown of sporophytic self-incompatibility in Tolpis coronopifolia (Asteraceae).

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Journal:  New Phytol       Date:  2017-09-11       Impact factor: 10.151

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Authors:  Mahmoud Houshyarfard; Hamid Rouhani; Mahrokh Falahati-Rastegar; Saeid Malekzadeh-Shafaroudi; Esmat Mahdikhani-Moghaddam
Journal:  Mol Biol Res Commun       Date:  2015-01

5.  Advances in plant gene-targeted and functional markers: a review.

Authors:  Péter Poczai; Ildikó Varga; Maarja Laos; András Cseh; Neil Bell; Jari Pt Valkonen; Jaakko Hyvönen
Journal:  Plant Methods       Date:  2013-02-13       Impact factor: 4.993

6.  Secondary metabolites from two species of Tolpis and their biological activities.

Authors:  Jorge Triana; Mariana López; Francisco Javier Pérez; Milagros Rico; Aroa López; Francisco Estévez; María Teresa Marrero; Ignacio Brouard; Francisco León
Journal:  Molecules       Date:  2012-11-01       Impact factor: 4.411

  6 in total

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