Literature DB >> 21636521

Phylogeny of the tribe Aveneae (Pooideae, Poaceae) inferred from plastid trnT-F and nuclear ITS sequences.

Alejandro Quintanar1, Santiago Castroviejo, Pilar Catalán.   

Abstract

New insights into evolutionary trends in the economically important oat tribe (Aveneae) are presented. Plastid trnT-F and nuclear ribosomal ITS sequences were used to reconstruct the phylogeny of the Aveneae-Poeae-Seslerieae complex (Pooideae, Poaceae) through Bayesian- and maximum parsimony-based analyses, separately and in combination. The plastid data identified a strongly supported core Aveneae lineage that separated from other former Aveneae and Poeae groups. Koeleriinae, Aveninae, and Agrostidinae emerged as the main groups of this core Aveneae, which also included other minor subgroups with uncertain relationships and a few former Poeae members. Several former Aveneae representatives were also placed in independent sublineages in Poeae. Seslerieae resolved as close allies of Poeae or Aveneae in the plastid and nuclear topologies, respectively. Because of the intermingling of some Aveneae and Seslerieae lineages in Poeae and vice versa, we propose to expand Poeae to include all the aforementioned lineages. This best reflects our current understanding of the phylogeny of these important temperate grasses and sheds light on their evolutionary history.

Entities:  

Year:  2007        PMID: 21636521     DOI: 10.3732/ajb.94.9.1554

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  16 in total

1.  A 250 plastome phylogeny of the grass family (Poaceae): topological support under different data partitions.

Authors:  Jeffery M Saarela; Sean V Burke; William P Wysocki; Matthew D Barrett; Lynn G Clark; Joseph M Craine; Paul M Peterson; Robert J Soreng; Maria S Vorontsova; Melvin R Duvall
Journal:  PeerJ       Date:  2018-02-02       Impact factor: 2.984

2.  Molecular phylogenetics of cool-season grasses in the subtribes Agrostidinae, Anthoxanthinae, Aveninae, Brizinae, Calothecinae, Koeleriinae and Phalaridinae (Poaceae, Pooideae, Poeae, Poeae chloroplast group 1).

Authors:  Jeffery M Saarela; Roger D Bull; Michel J Paradis; Sharon N Ebata; Robert J Soreng; Beata Paszko
Journal:  PhytoKeys       Date:  2017-10-09       Impact factor: 1.635

3.  Hybridization and long-distance colonization at different time scales: towards resolution of long-term controversies in the sweet vernal grasses (Anthoxanthum).

Authors:  Manuel Pimentel; Elvira Sahuquillo; Zeltia Torrecilla; Magnus Popp; Pilar Catalán; Christian Brochmann
Journal:  Ann Bot       Date:  2013-08-01       Impact factor: 4.357

4.  DNA barcoding the Canadian Arctic flora: core plastid barcodes (rbcL + matK) for 490 vascular plant species.

Authors:  Jeffery M Saarela; Paul C Sokoloff; Lynn J Gillespie; Laurie L Consaul; Roger D Bull
Journal:  PLoS One       Date:  2013-10-22       Impact factor: 3.240

5.  Plastid phylogenomics of the cool-season grass subfamily: clarification of relationships among early-diverging tribes.

Authors:  Jeffery M Saarela; William P Wysocki; Craig F Barrett; Robert J Soreng; Jerrold I Davis; Lynn G Clark; Scot A Kelchner; J Chris Pires; Patrick P Edger; Dustin R Mayfield; Melvin R Duvall
Journal:  AoB Plants       Date:  2015-05-04       Impact factor: 3.276

6.  Genome-wide association study based on multiple imputation with low-depth sequencing data: application to biofuel traits in reed canarygrass.

Authors:  Guillaume P Ramstein; Alexander E Lipka; Fei Lu; Denise E Costich; Jerome H Cherney; Edward S Buckler; Michael D Casler
Journal:  G3 (Bethesda)       Date:  2015-03-12       Impact factor: 3.154

7.  Karyotype evolution in Phalaris (Poaceae): The role of reductional dysploidy, polyploidy and chromosome alteration in a wide-spread and diverse genus.

Authors:  Grit Winterfeld; Hannes Becher; Stephanie Voshell; Khidir Hilu; Martin Röser
Journal:  PLoS One       Date:  2018-02-20       Impact factor: 3.240

8.  Early inflorescence development in the grasses (Poaceae).

Authors:  Elizabeth A Kellogg; Paulo E A S Camara; Paula J Rudall; Philip Ladd; Simon T Malcomber; Clinton J Whipple; Andrew N Doust
Journal:  Front Plant Sci       Date:  2013-07-23       Impact factor: 5.753

9.  Comparative genome analysis between Agrostis stolonifera and members of the Pooideae subfamily, including Brachypodium distachyon.

Authors:  Loreto Araneda; Sung-Chur Sim; Jin-Joo Bae; Nanda Chakraborty; Joe Curley; Taehyun Chang; Maiko Inoue; Scott Warnke; Geunhwa Jung
Journal:  PLoS One       Date:  2013-11-11       Impact factor: 3.240

10.  C4 photosynthesis promoted species diversification during the Miocene grassland expansion.

Authors:  Elizabeth L Spriggs; Pascal-Antoine Christin; Erika J Edwards
Journal:  PLoS One       Date:  2014-05-16       Impact factor: 3.240

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