Literature DB >> 21636391

Genomic relationships between the cultivated peanut (Arachis hypogaea, Leguminosae) and its close relatives revealed by double GISH.

Guillermo Seijo1, Graciela I Lavia, Aveliano Fernández, Antonio Krapovickas, Daniel A Ducasse, David J Bertioli, Eduardo A Moscone.   

Abstract

Arachis hypogaea is a natural, well-established allotetraploid (AABB) with 2n = 40. However, researchers disagree on the diploid genome donor species and on whether peanut originated by a single or multiple events of polyploidization. Here we provide evidence on the genetic origin of peanut and on the involved wild relatives using double GISH (genomic in situ hybridization). Seven wild diploid species (2n = 20), harboring either the A or B genome, were tested. Of all genomic DNA probe combinations assayed, A. duranensis (A genome) and A. ipaensis (B genome) appeared to be the best candidates for the genome donors because they yielded the most intense and uniform hybridization pattern when tested against the corresponding chromosome subsets of A. hypogaea. A similar GISH pattern was observed for all varieties of the cultigen and also for A. monticola. These results suggest that all presently known subspecies and varieties of A. hypogaea have arisen from a unique allotetraploid plant population, or alternatively, from different allotetraploid populations that originated from the same two diploid species. Furthermore, the bulk of the data demonstrated a close genomic relationship between both tetraploids and strongly supports the hypothesis that A. monticola is the immediate wild antecessor of A. hypogaea.

Entities:  

Year:  2007        PMID: 21636391     DOI: 10.3732/ajb.94.12.1963

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  72 in total

1.  An integrated genetic linkage map of cultivated peanut (Arachis hypogaea L.) constructed from two RIL populations.

Authors:  Hongde Qin; Suping Feng; Charles Chen; Yufang Guo; Steven Knapp; Albert Culbreath; Guohao He; Ming Li Wang; Xinyou Zhang; C Corley Holbrook; Peggy Ozias-Akins; Baozhu Guo
Journal:  Theor Appl Genet       Date:  2011-11-10       Impact factor: 5.699

2.  Matita, a new retroelement from peanut: characterization and evolutionary context in the light of the Arachis A-B genome divergence.

Authors:  Stephan Nielen; Bruna S Vidigal; Soraya C M Leal-Bertioli; Milind Ratnaparkhe; Andrew H Paterson; Olivier Garsmeur; Angélique D'Hont; Patricia M Guimarães; David J Bertioli
Journal:  Mol Genet Genomics       Date:  2011-11-27       Impact factor: 3.291

3.  The genome sequences of Arachis duranensis and Arachis ipaensis, the diploid ancestors of cultivated peanut.

Authors:  David John Bertioli; Steven B Cannon; Lutz Froenicke; Guodong Huang; Andrew D Farmer; Ethalinda K S Cannon; Xin Liu; Dongying Gao; Josh Clevenger; Sudhansu Dash; Longhui Ren; Márcio C Moretzsohn; Kenta Shirasawa; Wei Huang; Bruna Vidigal; Brian Abernathy; Ye Chu; Chad E Niederhuth; Pooja Umale; Ana Cláudia G Araújo; Alexander Kozik; Kyung Do Kim; Mark D Burow; Rajeev K Varshney; Xingjun Wang; Xinyou Zhang; Noelle Barkley; Patrícia M Guimarães; Sachiko Isobe; Baozhu Guo; Boshou Liao; H Thomas Stalker; Robert J Schmitz; Brian E Scheffler; Soraya C M Leal-Bertioli; Xu Xun; Scott A Jackson; Richard Michelmore; Peggy Ozias-Akins
Journal:  Nat Genet       Date:  2016-02-22       Impact factor: 38.330

4.  A first insight into population structure and linkage disequilibrium in the US peanut minicore collection.

Authors:  Vikas Belamkar; Michael Gomez Selvaraj; Jamie L Ayers; Paxton R Payton; Naveen Puppala; Mark D Burow
Journal:  Genetica       Date:  2011-03-27       Impact factor: 1.082

5.  Species relations among wild Arachis species with the A genome as revealed by FISH mapping of rDNA loci and heterochromatin detection.

Authors:  G Robledo; G I Lavia; G Seijo
Journal:  Theor Appl Genet       Date:  2009-02-21       Impact factor: 5.699

6.  FIDEL-a retrovirus-like retrotransposon and its distinct evolutionary histories in the A- and B-genome components of cultivated peanut.

Authors:  Stephan Nielen; Fernando Campos-Fonseca; Soraya Leal-Bertioli; Patricia Guimarães; Guillermo Seijo; Christopher Town; Roberto Arrial; David Bertioli
Journal:  Chromosome Res       Date:  2010-02-02       Impact factor: 5.239

7.  An analysis of synteny of Arachis with Lotus and Medicago sheds new light on the structure, stability and evolution of legume genomes.

Authors:  David J Bertioli; Marcio C Moretzsohn; Lene H Madsen; Niels Sandal; Soraya C M Leal-Bertioli; Patricia M Guimarães; Birgit K Hougaard; Jakob Fredslund; Leif Schauser; Anna M Nielsen; Shusei Sato; Satoshi Tabata; Steven B Cannon; Jens Stougaard
Journal:  BMC Genomics       Date:  2009-01-23       Impact factor: 3.969

8.  Identification of candidate genome regions controlling disease resistance in Arachis.

Authors:  Soraya C M Leal-Bertioli; Ana Carolina V F José; Dione M T Alves-Freitas; Márcio C Moretzsohn; Patrícia M Guimarães; Stephan Nielen; Bruna S Vidigal; Rinaldo W Pereira; Jodie Pike; Alessandra P Fávero; Martin Parniske; Rajeev K Varshney; David J Bertioli
Journal:  BMC Plant Biol       Date:  2009-08-22       Impact factor: 4.215

9.  Genetic relationships among seven sections of genus Arachis studied by using SSR markers.

Authors:  Ravi Koppolu; Hari D Upadhyaya; Sangam L Dwivedi; David A Hoisington; Rajeev K Varshney
Journal:  BMC Plant Biol       Date:  2010-01-20       Impact factor: 4.215

10.  A linkage map for the B-genome of Arachis (Fabaceae) and its synteny to the A-genome.

Authors:  Márcio C Moretzsohn; Andrea V G Barbosa; Dione M T Alves-Freitas; Cristiane Teixeira; Soraya C M Leal-Bertioli; Patrícia M Guimarães; Rinaldo W Pereira; Catalina R Lopes; Marcelo M Cavallari; José F M Valls; David J Bertioli; Marcos A Gimenes
Journal:  BMC Plant Biol       Date:  2009-04-07       Impact factor: 4.215

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