Literature DB >> 21632760

The 2.3-angstrom structure of porcine circovirus 2.

Reza Khayat1, Nicholas Brunn, Jeffrey A Speir, John M Hardham, Robert G Ankenbauer, Anette Schneemann, John E Johnson.   

Abstract

Porcine circovirus 2 (PCV2) is a T=1 nonenveloped icosahedral virus that has had severe impact on the swine industry. Here we report the crystal structure of an N-terminally truncated PCV2 virus-like particle at 2.3-Å resolution, and the cryo-electron microscopy (cryo-EM) image reconstruction of a full-length PCV2 virus-like particle at 9.6-Å resolution. This is the first atomic structure of a circovirus. The crystal structure revealed that the capsid protein fold is a canonical viral jelly roll. The loops connecting the strands of the jelly roll define the limited features of the surface. Sulfate ions interacting with the surface and electrostatic potential calculations strongly suggest a heparan sulfate binding site that allows PCV2 to gain entry into the cell. The crystal structure also allowed previously determined epitopes of the capsid to be visualized. The cryo-EM image reconstruction showed that the location of the N terminus, absent in the crystal structure, is inside the capsid. As the N terminus was previously shown to be antigenic, it may externalize through viral "breathing."

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Year:  2011        PMID: 21632760      PMCID: PMC3147897          DOI: 10.1128/JVI.00737-11

Source DB:  PubMed          Journal:  J Virol        ISSN: 0022-538X            Impact factor:   5.103


  36 in total

1.  EMAN: semiautomated software for high-resolution single-particle reconstructions.

Authors:  S J Ludtke; P R Baldwin; W Chiu
Journal:  J Struct Biol       Date:  1999-12-01       Impact factor: 2.867

2.  Transplacental infection with PCV-2 associated with reproductive failure in a gilt.

Authors:  A S Ladekjaer-Mikkelsen; J Nielsen; T Storgaard; A Bøtner; G Allan; F McNeilly
Journal:  Vet Rec       Date:  2001-06-16       Impact factor: 2.695

3.  AL2CO: calculation of positional conservation in a protein sequence alignment.

Authors:  J Pei; N V Grishin
Journal:  Bioinformatics       Date:  2001-08       Impact factor: 6.937

4.  T-Coffee: A novel method for fast and accurate multiple sequence alignment.

Authors:  C Notredame; D G Higgins; J Heringa
Journal:  J Mol Biol       Date:  2000-09-08       Impact factor: 5.469

Review 5.  Mode of action of linear amphipathic alpha-helical antimicrobial peptides.

Authors:  Z Oren; Y Shai
Journal:  Biopolymers       Date:  1998       Impact factor: 2.505

6.  Differential recognition of ORF2 protein from type 1 and type 2 porcine circoviruses and identification of immunorelevant epitopes.

Authors:  D Mahé; P Blanchard; C Truong; C Arnauld; P Le Cann; R Cariolet; F Madec; E Albina; A Jestin
Journal:  J Gen Virol       Date:  2000-07       Impact factor: 3.891

7.  Isolation and characterization of porcine circovirus 2 from cases of sow abortion and porcine dermatitis and nephropathy syndrome.

Authors:  B M Meehan; F McNeilly; I McNair; I Walker; J A Ellis; S Krakowka; G M Allan
Journal:  Arch Virol       Date:  2001       Impact factor: 2.574

8.  Identification of porcine circovirus in tissues of pigs with porcine dermatitis and nephropathy syndrome.

Authors:  C Rosell; J Segalés; J A Ramos-Vara; J M Folch; G M Rodríguez-Arrioja; C O Duran; M Balasch; J Plana-Durán; M Domingo
Journal:  Vet Rec       Date:  2000-01-08       Impact factor: 2.695

9.  Myocarditis and abortion associated with intrauterine infection of sows with porcine circovirus 2.

Authors:  K H West; J M Bystrom; C Wojnarowicz; N Shantz; M Jacobson; G M Allan; D M Haines; E G Clark; S Krakowka; F McNeilly; C Konoby; K Martin; J A Ellis
Journal:  J Vet Diagn Invest       Date:  1999-11       Impact factor: 1.279

10.  Genetic characterization of porcine circovirus-2 field isolates from PMWS pigs.

Authors:  Jin H Kim; Young S Lyoo
Journal:  J Vet Sci       Date:  2002-03       Impact factor: 1.672

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  51 in total

1.  Construction of a Lactobacillus plantarum Strain Expressing the Capsid Protein of Porcine Circovirus Type 2d (PCV2d) as an Oral Vaccine.

Authors:  Yi-Han Tseng; Cheng-Chu Hsieh; Tsun-Yung Kuo; Je-Ruei Liu; Ting-Yu Hsu; Shu-Chen Hsieh
Journal:  Indian J Microbiol       Date:  2019-10-23       Impact factor: 2.461

2.  The Carboxyl Terminus of the Porcine Circovirus Type 2 Capsid Protein Is Critical to Virus-Like Particle Assembly, Cell Entry, and Propagation.

Authors:  Yang Zhan; Wanting Yu; Xiong Cai; Xinnuo Lei; Hongyu Lei; Aibing Wang; Yujie Sun; Naidong Wang; Zhibang Deng; Yi Yang
Journal:  J Virol       Date:  2020-04-16       Impact factor: 5.103

3.  Circovirus transport proceeds via direct interaction of the cytoplasmic dynein IC1 subunit with the viral capsid protein.

Authors:  Jingjing Cao; Cui Lin; Huijuan Wang; Lun Wang; Niu Zhou; Yulan Jin; Min Liao; Jiyong Zhou
Journal:  J Virol       Date:  2014-12-24       Impact factor: 5.103

4.  In silico analyses of antigenicity and surface structure variation of an emerging porcine circovirus genotype 2b mutant, prevalent in southern China from 2013 to 2015.

Authors:  Yang Zhan; Naidong Wang; Zhe Zhu; Zhanfeng Wang; Aibing Wang; Zhibang Deng; Yi Yang
Journal:  J Gen Virol       Date:  2016-01-11       Impact factor: 3.891

5.  Development and application of a double-antigen sandwich enzyme-linked immunosorbent assay for detection of antibodies to porcine circovirus 2.

Authors:  Meng Ge; Wei Luo; Daliang Jiang; Runcheng Li; Wenwei Zhao; Guoliang Chen; Xingdong Yang; Xinglong Yu
Journal:  Clin Vaccine Immunol       Date:  2012-07-18

6.  Conformational Changes and Nuclear Entry of Porcine Circovirus without Disassembly.

Authors:  Huijuan Wang; Kailun Zhang; Cui Lin; Jianwei Zhou; Yulan Jin; Weiren Dong; Jinyan Gu; Jiyong Zhou
Journal:  J Virol       Date:  2019-09-30       Impact factor: 5.103

Review 7.  Rapidly expanding genetic diversity and host range of the Circoviridae viral family and other Rep encoding small circular ssDNA genomes.

Authors:  Eric Delwart; Linlin Li
Journal:  Virus Res       Date:  2011-12-06       Impact factor: 3.303

8.  Recognition of the different structural forms of the capsid protein determines the outcome following infection with porcine circovirus type 2.

Authors:  Benjamin R Trible; Andrew W Suddith; Maureen A Kerrigan; Ada G Cino-Ozuna; Richard A Hesse; Raymond R R Rowland
Journal:  J Virol       Date:  2012-10-03       Impact factor: 5.103

9.  Porcine Circovirus 2 Uses a Multitude of Weak Binding Sites To Interact with Heparan Sulfate, and the Interactions Do Not Follow the Symmetry of the Capsid.

Authors:  Sonali Dhindwal; Bryant Avila; Shanshan Feng; Reza Khayat
Journal:  J Virol       Date:  2019-03-05       Impact factor: 5.103

10.  2.9 Å Resolution Cryo-EM 3D Reconstruction of Close-Packed Virus Particles.

Authors:  Zheng Liu; Fei Guo; Feng Wang; Tian-Cheng Li; Wen Jiang
Journal:  Structure       Date:  2016-01-14       Impact factor: 5.006

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