Literature DB >> 21619002

15N solid-state NMR as a probe of flavin H-bonding.

Dongtao Cui1, Ronald L Koder, P Leslie Dutton, Anne-Frances Miller.   

Abstract

Flavins mediate a wide variety of chemical reactions in biology. To learn how one cofactor can be made to execute different reactions in different enzymes, we are developing solid-state NMR (SSNMR) to probe the flavin electronic structure, via the (15)N chemical shift tensor principal values (δ(ii)). We find that SSNMR has superior responsiveness to H-bonds, compared to solution NMR. H-bonding to a model of the flavodoxin active site produced an increase of 10 ppm in the δ(11) of N5, although none of the H-bonds directly engage N5, and solution NMR detected only a 4 ppm increase in the isotropic chemical shift (δ(iso)). Moreover SSNMR responded differently to different H-bonding environments, as H-bonding with water caused δ(11) to decrease by 6 ppm, whereas δ(iso) increased by less than 1 ppm. Our density functional theoretical (DFT) calculations reproduce the observations, validating the use of computed electronic structures to understand how H-bonds modulate the flavin's reactivity.

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Year:  2011        PMID: 21619002      PMCID: PMC3156030          DOI: 10.1021/jp202138d

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  41 in total

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Authors:  S G Mayhew
Journal:  Eur J Biochem       Date:  1999-10

2.  Biosynthesis of riboflavin. Single turnover kinetic analysis of 6,7-dimethyl-8-ribityllumazine synthase.

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Journal:  J Am Chem Soc       Date:  2003-04-16       Impact factor: 15.419

3.  Ionic states of substrates and transition state analogues at the catalytic sites of N-ribosyltransferases.

Authors:  Anthony A Sauve; Sean M Cahill; Stephan G Zech; Luiz A Basso; Andrzej Lewandowicz; Diogenes S Santos; Charles Grubmeyer; Gary B Evans; Richard H Furneaux; Peter C Tyler; Ann McDermott; Mark E Girvin; Vern L Schramm
Journal:  Biochemistry       Date:  2003-05-20       Impact factor: 3.162

4.  X-ray and NMR crystallography in an enzyme active site: the indoline quinonoid intermediate in tryptophan synthase.

Authors:  Jinfeng Lai; Dimitri Niks; Yachong Wang; Tatiana Domratcheva; Thomas R M Barends; Friedrich Schwarz; Ryan A Olsen; Douglas W Elliott; M Qaiser Fatmi; Chia-en A Chang; Ilme Schlichting; Michael F Dunn; Leonard J Mueller
Journal:  J Am Chem Soc       Date:  2010-12-10       Impact factor: 15.419

5.  15N solid-state NMR provides a sensitive probe of oxidized flavin reactive sites.

Authors:  Ronald L Koder; Joseph D Walsh; Maxim S Pometun; P Leslie Dutton; Richard J Wittebort; Anne-Frances Miller
Journal:  J Am Chem Soc       Date:  2006-11-29       Impact factor: 15.419

6.  A Flavin Analogue with Improved Solubility in Organic Solvents.

Authors:  Ronald L Koder; Bruce R Lichtenstein; Jose F Cerda; Anne-Frances Miller; P Leslie Dutton
Journal:  Tetrahedron Lett       Date:  2007-07-30       Impact factor: 2.415

7.  Mechanistic insights on riboflavin synthase inspired by selective binding of the 6,7-dimethyl-8-ribityllumazine exomethylene anion.

Authors:  Ryu-Ryun Kim; Boris Illarionov; Monika Joshi; Mark Cushman; Chan Yong Lee; Wolfgang Eisenreich; Markus Fischer; Adelbert Bacher
Journal:  J Am Chem Soc       Date:  2010-03-10       Impact factor: 15.419

8.  Intramolecular and intermolecular perturbation on electronic state of FAD free in solution and bound to flavoproteins: FTIR spectroscopic study by using the C = O stretching vibrations as probes.

Authors:  Yasuzo Nishina; Kyosuke Sato; Chiaki Setoyama; Haruhiko Tamaoki; Retsu Miura; Kiyoshi Shiga
Journal:  J Biochem       Date:  2007-08       Impact factor: 3.387

9.  13C-, 15N- and 31P-NMR studies of oxidized and reduced low molecular mass thioredoxin reductase and some mutant proteins.

Authors:  Wolfgang Eisenreich; Kristina Kemter; Adelbert Bacher; Scott B Mulrooney; Charles H Williams; Franz Müller
Journal:  Eur J Biochem       Date:  2004-04

10.  Changes in the kinetics and emission spectrum on mutation of the chromophore-binding platform in Vibrio harveyi luciferase.

Authors:  Leo Yen-Cheng Lin; Rose Szittner; Romy Friedman; Edward A Meighen
Journal:  Biochemistry       Date:  2004-03-23       Impact factor: 3.162

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  5 in total

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Authors:  Matthew Fritz; Caitlin M Quinn; Mingzhang Wang; Guangjin Hou; Xingyu Lu; Leonardus M I Koharudin; Jochem Struppe; David A Case; Tatyana Polenova; Angela M Gronenborn
Journal:  Phys Chem Chem Phys       Date:  2018-04-04       Impact factor: 3.676

2.  Oxidation-reduction and photophysical properties of isomeric forms of Safranin.

Authors:  Eskil M E Andersen; Hsin Wang; Joshua S H Khoo; Jose F Cerda; Ronald L Koder
Journal:  PLoS One       Date:  2022-06-24       Impact factor: 3.752

3.  Manipulating Reduction Potentials in an Artificial Safranin Cofactor.

Authors:  Gheevarghese Raju; Joseph Capo; Bruce R Lichtenstein; Jose F Cerda; Ronald L Koder
Journal:  Tetrahedron Lett       Date:  2011-12-14       Impact factor: 2.415

4.  Mutants of Cytochrome P450 Reductase Lacking Either Gly-141 or Gly-143 Destabilize Its FMN Semiquinone.

Authors:  Freeborn Rwere; Chuanwu Xia; Sangchoul Im; Mohammad M Haque; Dennis J Stuehr; Lucy Waskell; Jung-Ja P Kim
Journal:  J Biol Chem       Date:  2016-05-09       Impact factor: 5.157

5.  Ionic bis-nanoparticle networks.

Authors:  Marie-Alexandra Neouze; Marco Litschauer; Michael Puchberger; Johannes Bernardi
Journal:  Monatsh Chem       Date:  2012-01-21       Impact factor: 1.451

  5 in total

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