Literature DB >> 21618209

Zinc to cadmium replacement in the A. thaliana SUPERMAN Cys₂ His₂ zinc finger induces structural rearrangements of typical DNA base determinant positions.

Gaetano Malgieri1, Laura Zaccaro, Marilisa Leone, Enrico Bucci, Sabrina Esposito, Ilaria Baglivo, Annarita Del Gatto, Luigi Russo, Roberto Scandurra, Paolo V Pedone, Roberto Fattorusso, Carla Isernia.   

Abstract

Among heavy metals, whose toxicity cause a steadily increasing of environmental pollution, cadmium is of special concern due to its relatively high mobility in soils and potential toxicity at low concentrations. Given their ubiquitous role, zinc fingers domains have been proposed as mediators for the toxic and carcinogenic effects exerted by xenobiotic metals. To verify the structural effects of zinc replacement by cadmium in zinc fingers, we have determined the high resolution structure of the single Cys₂ His₂ zinc finger of the Arabidopsis thaliana SUPERMAN protein (SUP37) complexed to the cadmium ion by means of UV-vis and NMR techniques. SUP37 is able to bind Cd(II), though with a dissociation constant higher than that measured for Zn(II). Cd-SUP37 retains the ββα fold but experiences a global structural rearrangement affecting both the relative orientation of the secondary structure elements and the position of side chains involved in DNA recognition: among them Ser17 side chain, which we show to be essential for DNA binding, experiences the largest displacement. 2011 Wiley Periodicals, Inc.

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Year:  2011        PMID: 21618209     DOI: 10.1002/bip.21680

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  13 in total

1.  Crystal structure of the essential transcription antiterminator M2-1 protein of human respiratory syncytial virus and implications of its phosphorylation.

Authors:  Sian J Tanner; Antonio Ariza; Charles-Adrien Richard; Hannah F Kyle; Rachel L Dods; Marie-Lise Blondot; Weining Wu; José Trincão; Chi H Trinh; Julian A Hiscox; Miles W Carroll; Nigel J Silman; Jean-François Eléouët; Thomas A Edwards; John N Barr
Journal:  Proc Natl Acad Sci U S A       Date:  2014-01-13       Impact factor: 11.205

2.  Cu(I) Disrupts the Structure and Function of the Nonclassical Zinc Finger Protein Tristetraprolin (TTP).

Authors:  Geoffrey D Shimberg; Kiwon Ok; Heather M Neu; Kathryn E Splan; Sarah L J Michel
Journal:  Inorg Chem       Date:  2017-05-30       Impact factor: 5.165

3.  A strong 13C chemical shift signature provides the coordination mode of histidines in zinc-binding proteins.

Authors:  Pierre Barraud; Mario Schubert; Frédéric H-T Allain
Journal:  J Biomol NMR       Date:  2012-04-17       Impact factor: 2.835

4.  PatternQuery: web application for fast detection of biomacromolecular structural patterns in the entire Protein Data Bank.

Authors:  David Sehnal; Lukáš Pravda; Radka Svobodová Vařeková; Crina-Maria Ionescu; Jaroslav Koča
Journal:  Nucleic Acids Res       Date:  2015-05-26       Impact factor: 16.971

5.  Cadmium effects on superoxide dismutase 1 in human cells revealed by NMR.

Authors:  Panagis Polykretis; Francesca Cencetti; Chiara Donati; Enrico Luchinat; Lucia Banci
Journal:  Redox Biol       Date:  2019-01-08       Impact factor: 11.799

6.  Specificity of the Metallothionein-1 Response by Cadmium-Exposed Normal Human Urothelial Cells.

Authors:  Rhiannon V McNeill; Andrew S Mason; Mark E Hodson; James W F Catto; Jennifer Southgate
Journal:  Int J Mol Sci       Date:  2019-03-17       Impact factor: 5.923

Review 7.  The new insights into cadmium sensing.

Authors:  Jagna Chmielowska-Bąk; Jarosław Gzyl; Renata Rucińska-Sobkowiak; Magdalena Arasimowicz-Jelonek; Joanna Deckert
Journal:  Front Plant Sci       Date:  2014-06-03       Impact factor: 5.753

8.  Biophysical Studies of the Induced Dimerization of Human VEGF Receptor 1 Binding Domain by Divalent Metals Competing with VEGF-A.

Authors:  Jean-François Gaucher; Marie Reille-Seroussi; Nathalie Gagey-Eilstein; Sylvain Broussy; Pascale Coric; Bili Seijo; Marie-Bernard Lascombe; Benoit Gautier; Wang-Quing Liu; Florent Huguenot; Nicolas Inguimbert; Serge Bouaziz; Michel Vidal; Isabelle Broutin
Journal:  PLoS One       Date:  2016-12-12       Impact factor: 3.240

9.  Co(II) Coordination in Prokaryotic Zinc Finger Domains as Revealed by UV-Vis Spectroscopy.

Authors:  Valeria Sivo; Gianluca D'Abrosca; Luigi Russo; Rosa Iacovino; Paolo Vincenzo Pedone; Roberto Fattorusso; Carla Isernia; Gaetano Malgieri
Journal:  Bioinorg Chem Appl       Date:  2017-12-14       Impact factor: 7.778

10.  Structural Insight of the Full-Length Ros Protein: A Prototype of the Prokaryotic Zinc-Finger Family.

Authors:  Gianluca D'Abrosca; Antonella Paladino; Ilaria Baglivo; Luigi Russo; Marica Sassano; Rinaldo Grazioso; Rosa Iacovino; Luciano Pirone; Emilia Maria Pedone; Paolo Vincenzo Pedone; Carla Isernia; Roberto Fattorusso; Gaetano Malgieri
Journal:  Sci Rep       Date:  2020-06-09       Impact factor: 4.379

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