Literature DB >> 21617028

AtIPD: a curated database of Arabidopsis isoprenoid pathway models and genes for isoprenoid network analysis.

Eva Vranová1, Matthias Hirsch-Hoffmann, Wilhelm Gruissem.   

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Year:  2011        PMID： 21617028      PMCID： PMC3149963          DOI： 10.1104/pp.111.177758

Source DB:  PubMed          Journal:  Plant Physiol        ISSN： 0032-0889            Impact factor:   8.340


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  19 in total

1.  The sax1 mutation defines a new locus involved in the brassinosteroid biosynthesis pathway in Arabidopsis thaliana.

Authors:  G Ephritikhine; S Pagant; S Fujioka; S Takatsuto; D Lapous; M Caboche; R E Kendrick; H Barbier-Brygoo
Journal:  Plant J       Date:  1999-05       Impact factor: 6.417

2.  KEGG: Kyoto Encyclopedia of Genes and Genomes.

Authors:  H Ogata; S Goto; K Sato; W Fujibuchi; H Bono; M Kanehisa
Journal:  Nucleic Acids Res       Date:  1999-01-01       Impact factor: 16.971

3.  Physiological effects of the synthetic strigolactone analog GR24 on root system architecture in Arabidopsis: another belowground role for strigolactones?

Authors:  Carolien Ruyter-Spira; Wouter Kohlen; Tatsiana Charnikhova; Arjan van Zeijl; Laura van Bezouwen; Norbert de Ruijter; Catarina Cardoso; Juan Antonio Lopez-Raez; Radoslava Matusova; Ralph Bours; Francel Verstappen; Harro Bouwmeester
Journal:  Plant Physiol       Date:  2010-11-30       Impact factor: 8.340

4.  Biosynthetic pathways of brassinolide in Arabidopsis.

Authors:  T Noguchi; S Fujioka; S Choe; S Takatsuto; F E Tax; S Yoshida; K A Feldmann
Journal:  Plant Physiol       Date:  2000-09       Impact factor: 8.340

5.  Genomic analysis of the terpenoid synthase ( AtTPS) gene family of Arabidopsis thaliana.

Authors:  S Aubourg; A Lecharny; J Bohlmann
Journal:  Mol Genet Genomics       Date:  2002-06-29       Impact factor: 3.291

6.  Genome organization in Arabidopsis thaliana: a survey for genes involved in isoprenoid and chlorophyll metabolism.

Authors:  B Markus Lange; Majid Ghassemian
Journal:  Plant Mol Biol       Date:  2003-04       Impact factor: 4.076

7.  Intersection of the tocopherol and plastoquinol metabolic pathways at the plastoglobule.

Authors:  Anna Maria Zbierzak; Marion Kanwischer; Christina Wille; Pierre-Alexandre Vidi; Patrick Giavalisco; Antje Lohmann; Isabel Briesen; Svetlana Porfirova; Claire Bréhélin; Felix Kessler; Peter Dörmann
Journal:  Biochem J       Date:  2009-12-23       Impact factor: 3.857

8.  MAPMAN: a user-driven tool to display genomics data sets onto diagrams of metabolic pathways and other biological processes.

Authors:  Oliver Thimm; Oliver Bläsing; Yves Gibon; Axel Nagel; Svenja Meyer; Peter Krüger; Joachim Selbig; Lukas A Müller; Seung Y Rhee; Mark Stitt
Journal:  Plant J       Date:  2004-03       Impact factor: 6.417

9.  AraCyc: a biochemical pathway database for Arabidopsis.

Authors:  Lukas A Mueller; Peifen Zhang; Seung Y Rhee
Journal:  Plant Physiol       Date:  2003-06       Impact factor: 8.340

10.  A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases.

Authors:  Michelle L Green; Peter D Karp
Journal:  BMC Bioinformatics       Date:  2004-06-09       Impact factor: 3.169
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  14 in total

1.  ChloroKB: A Web Application for the Integration of Knowledge Related to Chloroplast Metabolic Network.

Authors:  Pauline Gloaguen; Sylvain Bournais; Claude Alban; Stéphane Ravanel; Daphné Seigneurin-Berny; Michel Matringe; Marianne Tardif; Marcel Kuntz; Myriam Ferro; Christophe Bruley; Norbert Rolland; Yves Vandenbrouck; Gilles Curien
Journal:  Plant Physiol       Date:  2017-04-25       Impact factor: 8.340

2.  Identification of geranylgeranyl diphosphate synthase genes from Tripterygium wilfordii.

Authors:  Meng Zhang; Ping Su; Yong-Jin Zhou; Xiu-Juan Wang; Yu-Jun Zhao; Yu-Jia Liu; Yu-Ru Tong; Tian-Yuan Hu; Lu-Qi Huang; Wei Gao
Journal:  Plant Cell Rep       Date:  2015-10-08       Impact factor: 4.570

3.  Characterization of the GGPP synthase gene family in Arabidopsis thaliana.

Authors:  Gilles Beck; Diana Coman; Edgar Herren; M Aguila Ruiz-Sola; Manuel Rodríguez-Concepción; Wilhelm Gruissem; Eva Vranová
Journal:  Plant Mol Biol       Date:  2013-06-01       Impact factor: 4.076

4.  Carotenoid biosynthesis in Arabidopsis: a colorful pathway.

Authors:  M Águila Ruiz-Sola; Manuel Rodríguez-Concepción
Journal:  Arabidopsis Book       Date:  2012-01-19

5.  The genes and enzymes of the carotenoid metabolic pathway in Vitis vinifera L.

Authors:  Philip R Young; Justin G Lashbrooke; Erik Alexandersson; Dan Jacobson; Claudio Moser; Riccardo Velasco; Melané A Vivier
Journal:  BMC Genomics       Date:  2012-06-15       Impact factor: 3.969

6.  A Single Arabidopsis Gene Encodes Two Differentially Targeted Geranylgeranyl Diphosphate Synthase Isoforms.

Authors:  M Águila Ruiz-Sola; M Victoria Barja; David Manzano; Briardo Llorente; Bert Schipper; Jules Beekwilder; Manuel Rodriguez-Concepcion
Journal:  Plant Physiol       Date:  2016-10-05       Impact factor: 8.005

7.  Expression and promoter analysis of MEP pathway enzyme-encoding genes in Pinus massoniana Lamb.

Authors:  Peihuang Zhu; Yu Chen; Fan Wu; Miaojing Meng; Kongshu Ji
Journal:  PeerJ       Date:  2022-04-12       Impact factor: 3.061

8.  Distinct evolutionary strategies in the GGPPS family from plants.

Authors:  Diana Coman; Adrian Altenhoff; Stefan Zoller; Wilhelm Gruissem; Eva Vranová
Journal:  Front Plant Sci       Date:  2014-05-27       Impact factor: 5.753

9.  The carotenoid biosynthetic and catabolic genes in wheat and their association with yellow pigments.

Authors:  Pasqualina Colasuonno; Maria Luisa Lozito; Ilaria Marcotuli; Domenica Nigro; Angelica Giancaspro; Giacomo Mangini; Pasquale De Vita; Anna Maria Mastrangelo; Nicola Pecchioni; Kelly Houston; Rosanna Simeone; Agata Gadaleta; Antonio Blanco
Journal:  BMC Genomics       Date:  2017-01-31       Impact factor: 3.969

10.  Molecular cloning and functional characterization of multiple geranylgeranyl pyrophosphate synthases (ApGGPPS) from Andrographis paniculata.

Authors:  Jian Wang; Hui-Xin Lin; Ping Su; Tong Chen; Juan Guo; Wei Gao; Lu-Qi Huang
Journal:  Plant Cell Rep       Date:  2018-11-17       Impact factor: 4.570
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