Literature DB >> 21616787

Polymorphic chloroplast microsatellite markers in the octoploid Lepidium meyenii (Brassicaceae) and cross-species amplification in Lepidium.

Nabeeh A Hasan1, Klaus Mummenhoff, Carlos F Quiros, C David Tay, C Donovan Bailey.   

Abstract

PREMISE OF THE STUDY: As a crop and medicinal plant, the octoploid Andean endemic Lepidium meyenii suffers from taxonomic uncertainty. Few molecular markers are available to genotype individuals or track gene flow in wild and cultivated material. • METHODS AND
RESULTS: Using available sequence data, eight cpSSR primer pairs were developed for L. meyenii. Levels of polymorphism checked in 56 individual L. meyenii, including cultivated and wild material, revealed that the number of alleles per locus ranged from three to five, and intrapopulation allele frequencies ranged from 0.071 to 1.0. Polymerase-chain-reaction screens using our cpSSR primers in 27 other Lepidium species and three Coronopus species suggested a high degree of interspecific amplification. •
CONCLUSIONS: These polymorphic cpSSR markers should prove useful in characterizing genetic variation among cultivated and wild L. meyenii. Additionally, interspecific amplifications suggest that these markers will be useful for the study of related taxa.

Entities:  

Year:  2010        PMID: 21616787      PMCID: PMC3613980          DOI: 10.3732/ajb.1000225

Source DB:  PubMed          Journal:  Am J Bot        ISSN: 0002-9122            Impact factor:   3.844


  3 in total

1.  Chloroplast simple sequence repeats (cpSSRs): technical resources and recommendations for expanding cpSSR discovery and applications to a wide array of plant species.

Authors:  Daniel Ebert; Rod Peakall
Journal:  Mol Ecol Resour       Date:  2009-01-28       Impact factor: 7.090

2.  cid: a rapid and efficient bioinformatic tool for the detection of SSRs from genomic libraries.

Authors:  Patrícia D Freitas; Diogo S Martins; Pedro M Galetti
Journal:  Mol Ecol Resour       Date:  2008-01       Impact factor: 7.090

3.  Antagonistic effect of Lepidium meyenii (red maca) on prostatic hyperplasia in adult mice.

Authors:  G F Gonzales; M Gasco; A Malheiros-Pereira; C Gonzales-Castañeda
Journal:  Andrologia       Date:  2008-06       Impact factor: 2.775

  3 in total

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