Literature DB >> 21607834

Epithelial tissue statistics: eliminating bias reveals morphological and morphogenetic features.

M P Miklius1, S Hilgenfeldt.   

Abstract

Geometric order in quasi-two-dimensional epithelia has been extensively researched in order to identify and classify different tissues to help our understanding of how tissues form (morphogenesis) and how their formation may be influenced (tissue regeneration). However, the significance of published data -such as the distribution of numbers of cell neighbors- has been debatable because of measurement bias. We shown that such bias can be detected and corrected without detailed knowledge of the original samples, using only the biased (measured) distributions. This is true for both of the most important sources of bias: the measurement of apparent four-fold vertices and the selective preference for measuring smaller cells introduced by selecting a finite sampling window. The resulting unbiased data allows for a meaningful comparison of all available data, from different sources, taken with different experimental resolution and methodology. Conclusive evidence is found that the apparent four-fold vertices are neither distributed randomly nor oriented randomly, revealing profound differences in topological correlation between proliferating and remodeling tissues. The method is applied to measurements of Drosophila wing tissue, where it successfully disentangles distributional moments, allowing for an assessment of their relative importance, independence, and significance in tissue identification and classification.

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Year:  2011        PMID: 21607834     DOI: 10.1140/epje/i2011-11050-7

Source DB:  PubMed          Journal:  Eur Phys J E Soft Matter        ISSN: 1292-8941            Impact factor:   1.890


  13 in total

1.  The Differential Interfacial Tension Hypothesis (DITH): a comprehensive theory for the self-rearrangement of embryonic cells and tissues.

Authors:  G Wayne Brodland
Journal:  J Biomech Eng       Date:  2002-04       Impact factor: 2.097

2.  Mechanics and remodelling of cell packings in epithelia.

Authors:  D B Staple; R Farhadifar; J-C Röper; B Aigouy; S Eaton; F Jülicher
Journal:  Eur Phys J E Soft Matter       Date:  2010-11-17       Impact factor: 1.890

3.  Morphometry and structure of natural random tilings.

Authors:  A Hočevar; S El Shawish; P Ziherl
Journal:  Eur Phys J E Soft Matter       Date:  2010-11-25       Impact factor: 1.890

4.  Hexagonal packing of Drosophila wing epithelial cells by the planar cell polarity pathway.

Authors:  Anne-Kathrin Classen; Kurt I Anderson; Eric Marois; Suzanne Eaton
Journal:  Dev Cell       Date:  2005-12       Impact factor: 12.270

5.  The emergence of geometric order in proliferating metazoan epithelia.

Authors:  Matthew C Gibson; Ankit B Patel; Radhika Nagpal; Norbert Perrimon
Journal:  Nature       Date:  2006-08-09       Impact factor: 49.962

6.  The influence of cell mechanics, cell-cell interactions, and proliferation on epithelial packing.

Authors:  Reza Farhadifar; Jens-Christian Röper; Benoit Aigouy; Suzanne Eaton; Frank Jülicher
Journal:  Curr Biol       Date:  2007-12-18       Impact factor: 10.834

7.  Physical modeling of cell geometric order in an epithelial tissue.

Authors:  Sascha Hilgenfeldt; Sinem Erisken; Richard W Carthew
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-11       Impact factor: 11.205

8.  The stationary state of epithelia.

Authors:  N Rivier; G Schliecker; B Dubertret
Journal:  Acta Biotheor       Date:  1995-12       Impact factor: 1.774

9.  The renewal of the epidermis: a topological mechanism.

Authors:  B Dubertret; N Rivier
Journal:  Biophys J       Date:  1997-07       Impact factor: 4.033

10.  CellProfiler: image analysis software for identifying and quantifying cell phenotypes.

Authors:  Anne E Carpenter; Thouis R Jones; Michael R Lamprecht; Colin Clarke; In Han Kang; Ola Friman; David A Guertin; Joo Han Chang; Robert A Lindquist; Jason Moffat; Polina Golland; David M Sabatini
Journal:  Genome Biol       Date:  2006-10-31       Impact factor: 13.583

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  1 in total

1.  Lewis' law revisited: the role of anisotropy in size-topology correlations.

Authors:  Sangwoo Kim; Muyun Cai; Sascha Hilgenfeldt
Journal:  New J Phys       Date:  2014-01       Impact factor: 3.729

  1 in total

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