Literature DB >> 21607693

The characteristics of allelic polymorphism in killer-immunoglobulin-like receptor framework genes in African Americans.

LiHua Hou1, Bo Jiang, Minghua Chen, Jennifer Ng, Carolyn Katovich Hurley.   

Abstract

The frequencies of alleles of killer cell immunoglobulin-like receptor genes, KIR3DL3 and KIR3DL2, and the carrier frequency of KIR2DL4 alleles have been determined from a population of African Americans (n = 100) by DNA sequencing of the coding regions. Fifty alleles of KIR3DL3 were observed with the most frequent, KIR3DL3*00901 (13%). KIR3DL2 was also diverse; 32 alleles with KIR3DL2*00103 the most frequent (17%). For KIR2DL4, of the 18 alleles observed, one allele, KIR2DL4*00103, was found in 64 of the 100 individuals. Thirty-six novel alleles encoding a total of 28 unique receptors are described. Pairwise comparisons among all of the alleles at each locus suggest a predominance of synonymous substitutions. The variation at all three framework loci fits a neutral model of evolution.

Entities:  

Mesh:

Substances:

Year:  2011        PMID: 21607693      PMCID: PMC3476846          DOI: 10.1007/s00251-011-0536-6

Source DB:  PubMed          Journal:  Immunogenetics        ISSN: 0093-7711            Impact factor:   2.846


  55 in total

1.  A correction to the exact test based on the Ewens sampling distribution.

Authors:  M Slatkin
Journal:  Genet Res       Date:  1996-12       Impact factor: 1.588

2.  Statistical method for testing the neutral mutation hypothesis by DNA polymorphism.

Authors:  F Tajima
Journal:  Genetics       Date:  1989-11       Impact factor: 4.562

3.  Different NK cell surface phenotypes defined by the DX9 antibody are due to KIR3DL1 gene polymorphism.

Authors:  C M Gardiner; L A Guethlein; H G Shilling; M Pando; W H Carr; R Rajalingam; C Vilches; P Parham
Journal:  J Immunol       Date:  2001-03-01       Impact factor: 5.422

4.  The neighbor-joining method: a new method for reconstructing phylogenetic trees.

Authors:  N Saitou; M Nei
Journal:  Mol Biol Evol       Date:  1987-07       Impact factor: 16.240

5.  Domain shuffling has been the main mechanism forming new hominoid killer cell Ig-like receptors.

Authors:  Raja Rajalingam; Peter Parham; Laurent Abi-Rached
Journal:  J Immunol       Date:  2004-01-01       Impact factor: 5.422

6.  The genetic structure and history of Africans and African Americans.

Authors:  Sarah A Tishkoff; Floyd A Reed; Françoise R Friedlaender; Christopher Ehret; Alessia Ranciaro; Alain Froment; Jibril B Hirbo; Agnes A Awomoyi; Jean-Marie Bodo; Ogobara Doumbo; Muntaser Ibrahim; Abdalla T Juma; Maritha J Kotze; Godfrey Lema; Jason H Moore; Holly Mortensen; Thomas B Nyambo; Sabah A Omar; Kweli Powell; Gideon S Pretorius; Michael W Smith; Mahamadou A Thera; Charles Wambebe; James L Weber; Scott M Williams
Journal:  Science       Date:  2009-04-30       Impact factor: 47.728

7.  KIR2DL4 (CD158d), an NK cell-activating receptor with inhibitory potential.

Authors:  Mathias Faure; Eric O Long
Journal:  J Immunol       Date:  2002-06-15       Impact factor: 5.422

8.  In contrast to other stimulatory natural killer cell immunoglobulin-like receptor loci, several KIR2DS5 alleles predominate in African Americans.

Authors:  LiHua Hou; Minghua Chen; Bo Jiang; Kanthi Kariyawasam; Jennifer Ng; Carolyn Katovich Hurley
Journal:  Hum Immunol       Date:  2009-05-03       Impact factor: 2.850

9.  Comparative genomics of natural killer cell receptor gene clusters.

Authors:  James Kelley; Lutz Walter; John Trowsdale
Journal:  PLoS Genet       Date:  2005-08       Impact factor: 5.917

10.  Roles for HLA and KIR polymorphisms in natural killer cell repertoire selection and modulation of effector function.

Authors:  Makoto Yawata; Nobuyo Yawata; Monia Draghi; Ann-Margaret Little; Fotini Partheniou; Peter Parham
Journal:  J Exp Med       Date:  2006-03-13       Impact factor: 14.307

View more
  4 in total

1.  Defining KIR and HLA Class I Genotypes at Highest Resolution via High-Throughput Sequencing.

Authors:  Paul J Norman; Jill A Hollenbach; Neda Nemat-Gorgani; Wesley M Marin; Steven J Norberg; Elham Ashouri; Jyothi Jayaraman; Emily E Wroblewski; John Trowsdale; Raja Rajalingam; Jorge R Oksenberg; Jacques Chiaroni; Lisbeth A Guethlein; James A Traherne; Mostafa Ronaghi; Peter Parham
Journal:  Am J Hum Genet       Date:  2016-08-04       Impact factor: 11.025

2.  KIR diversity in Māori and Polynesians: populations in which HLA-B is not a significant KIR ligand.

Authors:  Neda Nemat-Gorgani; Hisham A Edinur; Jill A Hollenbach; James A Traherne; Paul P J Dunn; Geoffrey K Chambers; Peter Parham; Paul J Norman
Journal:  Immunogenetics       Date:  2014-08-21       Impact factor: 2.846

3.  Co-evolution of human leukocyte antigen (HLA) class I ligands with killer-cell immunoglobulin-like receptors (KIR) in a genetically diverse population of sub-Saharan Africans.

Authors:  Paul J Norman; Jill A Hollenbach; Neda Nemat-Gorgani; Lisbeth A Guethlein; Hugo G Hilton; Marcelo J Pando; Kwadwo A Koram; Eleanor M Riley; Laurent Abi-Rached; Peter Parham
Journal:  PLoS Genet       Date:  2013-10-31       Impact factor: 5.917

4.  Conservation, Extensive Heterozygosity, and Convergence of Signaling Potential All Indicate a Critical Role for KIR3DL3 in Higher Primates.

Authors:  Laura A Leaton; Jonathan Shortt; Katherine M Kichula; Sudan Tao; Neda Nemat-Gorgani; Alexander J Mentzer; Stephen J Oppenheimer; Zhihui Deng; Jill A Hollenbach; Christopher R Gignoux; Lisbeth A Guethlein; Peter Parham; Mary Carrington; Paul J Norman
Journal:  Front Immunol       Date:  2019-01-28       Impact factor: 7.561

  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.