Literature DB >> 21607657

MicroRNAs as regulators of root development and architecture.

Ghazanfar A Khan1, Marie Declerck, Céline Sorin, Caroline Hartmann, Martin Crespi, Christine Lelandais-Brière.   

Abstract

MicroRNAs (miRNAs) are post-transcriptional regulators of growth and development in both plants and animals. In plants, roots play essential roles in their anchorage to the soil as well as in nutrient and water uptake. In this review, we present recent advances made in the identification of miRNAs involved in embryonic root development, radial patterning, vascular tissue differentiation and formation of lateral organs (i.e., lateral and adventitious roots and symbiotic nitrogen-fixing nodules in legumes). Certain mi/siRNAs target members of the Auxin Response Factors family involved in auxin homeostasis and signalling and participate in complex regulatory loops at several crucial stages of root development. Other miRNAs target and restrict the action of various transcription factors that control root-related processes in several species. Finally, because abiotic stresses, which include nutrient or water deficiencies, generally modulate root growth and branching, we summarise the action of certain miRNAs in response to these stresses that may be involved in the adaptation of the root system architecture to the soil environment.

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Year:  2011        PMID: 21607657     DOI: 10.1007/s11103-011-9793-x

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  106 in total

1.  Cell-specific nitrogen responses mediate developmental plasticity.

Authors:  Miriam L Gifford; Alexis Dean; Rodrigo A Gutierrez; Gloria M Coruzzi; Kenneth D Birnbaum
Journal:  Proc Natl Acad Sci U S A       Date:  2008-01-07       Impact factor: 11.205

Review 2.  De novo organ formation from differentiated cells: root nodule organogenesis.

Authors:  Martin Crespi; Florian Frugier
Journal:  Sci Signal       Date:  2008-12-09       Impact factor: 8.192

3.  Expression pattern suggests a role of MiR399 in the regulation of the cellular response to local Pi increase during arbuscular mycorrhizal symbiosis.

Authors:  Anja Branscheid; Daniela Sieh; Bikram Datt Pant; Patrick May; Emanuel A Devers; Anders Elkrog; Leif Schauser; Wolf-Rüdiger Scheible; Franziska Krajinski
Journal:  Mol Plant Microbe Interact       Date:  2010-07       Impact factor: 4.171

4.  The liguleless-1 gene acts tissue specifically in maize leaf development.

Authors:  P W Becraft; D K Bongard-Pierce; A W Sylvester; R S Poethig; M Freeling
Journal:  Dev Biol       Date:  1990-09       Impact factor: 3.582

5.  Identification of drought tolerance determinants by genetic analysis of root response to drought stress and abscisic Acid.

Authors:  Liming Xiong; Rui-Gang Wang; Guohong Mao; Jessica M Koczan
Journal:  Plant Physiol       Date:  2006-09-08       Impact factor: 8.340

6.  MicroRNA directs mRNA cleavage of the transcription factor NAC1 to downregulate auxin signals for arabidopsis lateral root development.

Authors:  Hui-Shan Guo; Qi Xie; Ji-Feng Fei; Nam-Hai Chua
Journal:  Plant Cell       Date:  2005-04-13       Impact factor: 11.277

7.  Auxin and light control of adventitious rooting in Arabidopsis require ARGONAUTE1.

Authors:  Céline Sorin; John D Bussell; Isabelle Camus; Karin Ljung; Mariusz Kowalczyk; Gaia Geiss; Heather McKhann; Christophe Garcion; Hervé Vaucheret; Göran Sandberg; Catherine Bellini
Journal:  Plant Cell       Date:  2005-04-13       Impact factor: 11.277

8.  The bifunctional abiotic stress signalling regulator and endogenous RNA silencing suppressor FIERY1 is required for lateral root formation.

Authors:  Hao Chen; Liming Xiong
Journal:  Plant Cell Environ       Date:  2010-09-28       Impact factor: 7.228

9.  SERRATE coordinates shoot meristem function and leaf axial patterning in Arabidopsis.

Authors:  Stephen P Grigg; Claudia Canales; Angela Hay; Miltos Tsiantis
Journal:  Nature       Date:  2005-10-13       Impact factor: 49.962

10.  Phosphorus stress in common bean: root transcript and metabolic responses.

Authors:  Georgina Hernández; Mario Ramírez; Oswaldo Valdés-López; Mesfin Tesfaye; Michelle A Graham; Tomasz Czechowski; Armin Schlereth; Maren Wandrey; Alexander Erban; Foo Cheung; Hank C Wu; Miguel Lara; Christopher D Town; Joachim Kopka; Michael K Udvardi; Carroll P Vance
Journal:  Plant Physiol       Date:  2007-04-20       Impact factor: 8.340

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  51 in total

Review 1.  Complexity of miRNA-dependent regulation in root symbiosis.

Authors:  Jérémie Bazin; Pilar Bustos-Sanmamed; Caroline Hartmann; Christine Lelandais-Brière; Martin Crespi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-06-05       Impact factor: 6.237

Review 2.  Auxin and the integration of environmental signals into plant root development.

Authors:  Kemal Kazan
Journal:  Ann Bot       Date:  2013-10-17       Impact factor: 4.357

3.  Identification of miRNAs and their targets in regulating tuberous root development in radish using small RNA and degradome analyses.

Authors:  Chen Liu; Xianxian Liu; Wenling Xu; Weimin Fu; Fengde Wang; Jianwei Gao; Qiaoyun Li; Zhigang Zhang; Jingjuan Li; Shufen Wang
Journal:  3 Biotech       Date:  2018-07-10       Impact factor: 2.406

4.  Balanced activity of microRNA166/165 and its target transcripts from the class III homeodomain-leucine zipper family regulates root growth in Arabidopsis thaliana.

Authors:  Archita Singh; Sharmila Singh; Kishore C S Panigrahi; Ralf Reski; Ananda K Sarkar
Journal:  Plant Cell Rep       Date:  2014-02-07       Impact factor: 4.570

5.  Computational identification and comparative analysis of miRNA precursors in three palm species.

Authors:  Aline Cunha da Silva; Clícia Grativol; Flávia Thiebaut; Adriana Silva Hemerly; Paulo Cavalcanti Gomes Ferreira
Journal:  Planta       Date:  2016-02-26       Impact factor: 4.116

Review 6.  Transcription factors network in root endosymbiosis establishment and development.

Authors:  Issa Diédhiou; Diaga Diouf
Journal:  World J Microbiol Biotechnol       Date:  2018-02-15       Impact factor: 3.312

7.  Evolutionary history of mitogen-activated protein kinase (MAPK) genes in Lotus, Medicago, and Phaseolus.

Authors:  Achal Neupane; Madhav P Nepal; Benjamin V Benson; Kenton J Macarthur; Sarbottam Piya
Journal:  Plant Signal Behav       Date:  2013-12-02

Review 8.  miRNA-based heavy metal homeostasis and plant growth.

Authors:  Ali Noman; Muhammad Aqeel
Journal:  Environ Sci Pollut Res Int       Date:  2017-02-22       Impact factor: 4.223

9.  IAA-Ala Resistant3, an evolutionarily conserved target of miR167, mediates Arabidopsis root architecture changes during high osmotic stress.

Authors:  Natsuko Kinoshita; Huan Wang; Hiroyuki Kasahara; Jun Liu; Cameron Macpherson; Yasunori Machida; Yuji Kamiya; Matthew A Hannah; Nam-Hai Chua
Journal:  Plant Cell       Date:  2012-09-07       Impact factor: 11.277

Review 10.  Reactive Oxygen Species Link Gene Regulatory Networks During Arabidopsis Root Development.

Authors:  Kosuke Mase; Hironaka Tsukagoshi
Journal:  Front Plant Sci       Date:  2021-04-27       Impact factor: 5.753

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