Literature DB >> 21606328

Human telomerase model shows the role of the TEN domain in advancing the double helix for the next polymerization step.

Kamil Steczkiewicz1, Michael T Zimmermann, Mateusz Kurcinski, Benjamin A Lewis, Drena Dobbs, Andrzej Kloczkowski, Robert L Jernigan, Andrzej Kolinski, Krzysztof Ginalski.   

Abstract

Telomerases constitute a group of specialized ribonucleoprotein enzymes that remediate chromosomal shrinkage resulting from the "end-replication" problem. Defects in telomere length regulation are associated with several diseases as well as with aging and cancer. Despite significant progress in understanding the roles of telomerase, the complete structure of the human telomerase enzyme bound to telomeric DNA remains elusive, with the detailed molecular mechanism of telomere elongation still unknown. By application of computational methods for distant homology detection, comparative modeling, and molecular docking, guided by available experimental data, we have generated a three-dimensional structural model of a partial telomerase elongation complex composed of three essential protein domains bound to a single-stranded telomeric DNA sequence in the form of a heteroduplex with the template region of the human RNA subunit, TER. This model provides a structural mechanism for the processivity of telomerase and offers new insights into elongation. We conclude that the RNADNA heteroduplex is constrained by the telomerase TEN domain through repeated extension cycles and that the TEN domain controls the process by moving the template ahead one base at a time by translation and rotation of the double helix. The RNA region directly following the template can bind complementarily to the newly synthesized telomeric DNA, while the template itself is reused in the telomerase active site during the next reaction cycle. This first structural model of the human telomerase enzyme provides many details of the molecular mechanism of telomerase and immediately provides an important target for rational drug design.

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Year:  2011        PMID: 21606328      PMCID: PMC3111281          DOI: 10.1073/pnas.1015399108

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  63 in total

1.  Protein secondary structure prediction based on position-specific scoring matrices.

Authors:  D T Jones
Journal:  J Mol Biol       Date:  1999-09-17       Impact factor: 5.469

Review 2.  Adding to the ends: what makes telomerase processive and how important is it?

Authors:  Neal F Lue
Journal:  Bioessays       Date:  2004-09       Impact factor: 4.345

3.  Rapid refinement of protein interfaces incorporating solvation: application to the docking problem.

Authors:  R M Jackson; H A Gabb; M J Sternberg
Journal:  J Mol Biol       Date:  1998-02-13       Impact factor: 5.469

Review 4.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

5.  Altering specific telomerase RNA template residues affects active site function.

Authors:  D Gilley; M S Lee; E H Blackburn
Journal:  Genes Dev       Date:  1995-09-15       Impact factor: 11.361

6.  Reconstitution of human telomerase with the template RNA component hTR and the catalytic protein subunit hTRT.

Authors:  S L Weinrich; R Pruzan; L Ma; M Ouellette; V M Tesmer; S E Holt; A G Bodnar; S Lichtsteiner; N W Kim; J B Trager; R D Taylor; R Carlos; W H Andrews; W E Wright; J W Shay; C B Harley; G B Morin
Journal:  Nat Genet       Date:  1997-12       Impact factor: 38.330

7.  Reverse transcriptase motifs in the catalytic subunit of telomerase.

Authors:  J Lingner; T R Hughes; A Shevchenko; M Mann; V Lundblad; T R Cech
Journal:  Science       Date:  1997-04-25       Impact factor: 47.728

8.  The RNA component of human telomerase.

Authors:  J Feng; W D Funk; S S Wang; S L Weinrich; A A Avilion; C P Chiu; R R Adams; E Chang; R C Allsopp; J Yu
Journal:  Science       Date:  1995-09-01       Impact factor: 47.728

9.  Death receptor signaling regulatory function for telomerase: hTERT abolishes TRAIL-induced apoptosis, independently of telomere maintenance.

Authors:  Charles Dudognon; Frédéric Pendino; Josette Hillion; Anne Saumet; Michel Lanotte; Evelyne Ségal-Bendirdjian
Journal:  Oncogene       Date:  2004-09-30       Impact factor: 9.867

10.  ConSurf 2005: the projection of evolutionary conservation scores of residues on protein structures.

Authors:  Meytal Landau; Itay Mayrose; Yossi Rosenberg; Fabian Glaser; Eric Martz; Tal Pupko; Nir Ben-Tal
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

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  20 in total

1.  Elastic network normal modes provide a basis for protein structure refinement.

Authors:  Pawel Gniewek; Andrzej Kolinski; Robert L Jernigan; Andrzej Kloczkowski
Journal:  J Chem Phys       Date:  2012-05-21       Impact factor: 3.488

2.  Structural Analysis Reveals the Deleterious Effects of Telomerase Mutations in Bone Marrow Failure Syndromes.

Authors:  Hunter Hoffman; Cory Rice; Emmanuel Skordalakes
Journal:  J Biol Chem       Date:  2017-02-01       Impact factor: 5.157

3.  Molecular modeling of the binding modes of the iron-sulfur protein to the Jac1 co-chaperone from Saccharomyces cerevisiae by all-atom and coarse-grained approaches.

Authors:  Magdalena A Mozolewska; Paweł Krupa; Harold A Scheraga; Adam Liwo
Journal:  Proteins       Date:  2015-06-06

Review 4.  Progress in structural studies of telomerase.

Authors:  Edward J Miracco; Jiansen Jiang; Darian D Cash; Juli Feigon
Journal:  Curr Opin Struct Biol       Date:  2014-02-04       Impact factor: 6.809

Review 5.  Single-molecule analysis of telomerase structure and function.

Authors:  Martin Hengesbach; Benjamin M Akiyama; Michael D Stone
Journal:  Curr Opin Chem Biol       Date:  2011-11-05       Impact factor: 8.822

6.  Coarse grained normal mode analysis vs. refined Gaussian Network Model for protein residue-level structural fluctuations.

Authors:  Jun-Koo Park; Robert Jernigan; Zhijun Wu
Journal:  Bull Math Biol       Date:  2013-01-08       Impact factor: 1.758

7.  Structural Basis of Telomerase Inhibition by the Highly Specific BIBR1532.

Authors:  Christopher Bryan; Cory Rice; Hunter Hoffman; Michael Harkisheimer; Melanie Sweeney; Emmanuel Skordalakes
Journal:  Structure       Date:  2015-09-10       Impact factor: 5.006

8.  Direct observation of nucleic acid binding dynamics by the telomerase essential N-terminal domain.

Authors:  Shankar Shastry; Olga Steinberg-Neifach; Neal Lue; Michael D Stone
Journal:  Nucleic Acids Res       Date:  2018-04-06       Impact factor: 16.971

9.  The TPR-containing domain within Est1 homologs exhibits species-specific roles in telomerase interaction and telomere length homeostasis.

Authors:  David C F Sealey; Aleksandar D Kostic; Catherine LeBel; Fiona Pryde; Lea Harrington
Journal:  BMC Mol Biol       Date:  2011-10-18       Impact factor: 2.946

10.  The architecture of Tetrahymena telomerase holoenzyme.

Authors:  Jiansen Jiang; Edward J Miracco; Kyungah Hong; Barbara Eckert; Henry Chan; Darian D Cash; Bosun Min; Z Hong Zhou; Kathleen Collins; Juli Feigon
Journal:  Nature       Date:  2013-04-03       Impact factor: 49.962

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