Literature DB >> 21603108

PyMC: Bayesian Stochastic Modelling in Python.

Anand Patil1, David Huard, Christopher J Fonnesbeck.   

Abstract

This user guide describes a Python package, PyMC, that allows users to efficiently code a probabilistic model and draw samples from its posterior distribution using Markov chain Monte Carlo techniques.

Entities:  

Year:  2010        PMID： 21603108      PMCID： PMC3097064     

Source DB:  PubMed          Journal:  J Stat Softw        ISSN： 1548-7660            Impact factor:   6.440


  91 in total

1.  Recovery potential of the world's coral reef fishes.

Authors:  M Aaron MacNeil; Nicholas A J Graham; Joshua E Cinner; Shaun K Wilson; Ivor D Williams; Joseph Maina; Steven Newman; Alan M Friedlander; Stacy Jupiter; Nicholas V C Polunin; Tim R McClanahan
Journal:  Nature       Date:  2015-04-08       Impact factor: 49.962

2.  Magnetic resonance imaging for locating nonpalpable undescended testicles: a meta-analysis.

Authors:  Shanthi Krishnaswami; Christopher Fonnesbeck; David Penson; Melissa L McPheeters
Journal:  Pediatrics       Date:  2013-05-20       Impact factor: 7.124

3.  Inferring patterns of influenza transmission in swine from multiple streams of surveillance data.

Authors:  Christopher C Strelioff; Dhanasekaran Vijaykrishna; Steven Riley; Yi Guan; J S Malik Peiris; James O Lloyd-Smith
Journal:  Proc Biol Sci       Date:  2013-05-08       Impact factor: 5.349

4.  Rich analysis and rational models: inferring individual behavior from infant looking data.

Authors:  Steven T Piantadosi; Celeste Kidd; Richard Aslin
Journal:  Dev Sci       Date:  2014-02-07

5.  Predicting climate-driven regime shifts versus rebound potential in coral reefs.

Authors:  Nicholas A J Graham; Simon Jennings; M Aaron MacNeil; David Mouillot; Shaun K Wilson
Journal:  Nature       Date:  2015-01-14       Impact factor: 49.962

6.  A Bayesian Double Fusion Model for Resting-State Brain Connectivity Using Joint Functional and Structural Data.

Authors:  Hakmook Kang; Hernando Ombao; Christopher Fonnesbeck; Zhaohua Ding; Victoria L Morgan
Journal:  Brain Connect       Date:  2017-04-24

7.  Inferring stratified parasitoid dispersal mechanisms and parameters from coarse data using mathematical and Bayesian methods.

Authors:  Christopher Strickland; Nadiah P Kristensen; Laura Miller
Journal:  J R Soc Interface       Date:  2017-05       Impact factor: 4.118

8.  Water vapour absorption in the clear atmosphere of a Neptune-sized exoplanet.

Authors:  Jonathan Fraine; Drake Deming; Bjorn Benneke; Heather Knutson; Andrés Jordán; Néstor Espinoza; Nikku Madhusudhan; Ashlee Wilkins; Kamen Todorov
Journal:  Nature       Date:  2014-09-25       Impact factor: 49.962

9.  The Processing-Speed Impairment in Psychosis Is More Than Just Accelerated Aging.

Authors:  Samuel R Mathias; Emma E M Knowles; Jennifer Barrett; Olivia Leach; Sebastiano Buccheri; Tamara Beetham; John Blangero; Russell A Poldrack; David C Glahn
Journal:  Schizophr Bull       Date:  2017-07-01       Impact factor: 9.306

10.  Deciphering the regulatory genome of Escherichia coli, one hundred promoters at a time.

Authors:  William T Ireland; Suzannah M Beeler; Emanuel Flores-Bautista; Nicholas S McCarty; Tom Röschinger; Nathan M Belliveau; Michael J Sweredoski; Annie Moradian; Justin B Kinney; Rob Phillips
Journal:  Elife       Date:  2020-09-21       Impact factor: 8.140
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