Literature DB >> 21599647

Lipid-protein interactions as determinants of membrane protein structure and function.

William Dowhan1, Mikhail Bogdanov.   

Abstract

To determine how the lipid environment affects membrane protein structure and function, strains of Escherichia coli were developed in which normal phospholipid composition can be altered or foreign lipids can be introduced. The properties of LacY (lactose permease) were investigated as a function of lipid environment. Assembly of LacY in membranes lacking PE (phosphatidylethanolamine) results in misorientation of the N-terminal six-TM (transmembrane domain) helical bundle with loss of energy-dependent uphill transport and retention of energy-independent downhill transport. Post-assembly introduction of PE results in nearly native orientation of TMs and restoration of uphill transport. Foreign lipids with no net charge can substitute for PE in supporting native LacY topology, but restoration of uphill transport is dependent on native topology and the proper folding of a solvent-exposed domain. Increasing the positive charge density of the cytoplasmically exposed surface of LacY counters TM misorientation in the absence of neutral lipids, demonstrating that charge interactions between these domains and the surface of the membrane bilayer are determinants of TM orientation. Therefore membrane protein organization or reorganization is determined either during initial assembly or post-insertionally through direct interactions between the protein and the lipid environment, which affects the topogenic potency of opposing charged residues as topological signals independent of the translocon.

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Year:  2011        PMID: 21599647      PMCID: PMC3348788          DOI: 10.1042/BST0390767

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  44 in total

1.  Structure and mechanism of the lactose permease of Escherichia coli.

Authors:  Jeff Abramson; Irina Smirnova; Vladimir Kasho; Gillian Verner; H Ronald Kaback; So Iwata
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

2.  Topogenic signals in integral membrane proteins.

Authors:  G von Heijne; Y Gavel
Journal:  Eur J Biochem       Date:  1988-07-01

3.  Phospholipid-assisted protein folding: phosphatidylethanolamine is required at a late step of the conformational maturation of the polytopic membrane protein lactose permease.

Authors:  M Bogdanov; W Dowhan
Journal:  EMBO J       Date:  1998-09-15       Impact factor: 11.598

4.  Phosphatidylethanolamine and monoglucosyldiacylglycerol are interchangeable in supporting topogenesis and function of the polytopic membrane protein lactose permease.

Authors:  Jun Xie; Mikhail Bogdanov; Philip Heacock; William Dowhan
Journal:  J Biol Chem       Date:  2006-05-12       Impact factor: 5.157

5.  Monoglucosyldiacylglycerol, a foreign lipid, can substitute for phosphatidylethanolamine in essential membrane-associated functions in Escherichia coli.

Authors:  Malin Wikström; Jun Xie; Mikhail Bogdanov; Eugenia Mileykovskaya; Philip Heacock; Ake Wieslander; William Dowhan
Journal:  J Biol Chem       Date:  2003-12-19       Impact factor: 5.157

Review 6.  Molecular genetic approaches to defining lipid function.

Authors:  William Dowhan
Journal:  J Lipid Res       Date:  2008-10-30       Impact factor: 5.922

7.  Cellular mechanisms of membrane protein folding.

Authors:  William R Skach
Journal:  Nat Struct Mol Biol       Date:  2009-06       Impact factor: 15.369

8.  Identification of the epitope for monoclonal antibody 4B1 which uncouples lactose and proton translocation in the lactose permease of Escherichia coli.

Authors:  J Sun; J Wu; N Carrasco; H R Kaback
Journal:  Biochemistry       Date:  1996-01-23       Impact factor: 3.162

Review 9.  Lipid-dependent membrane protein topogenesis.

Authors:  William Dowhan; Mikhail Bogdanov
Journal:  Annu Rev Biochem       Date:  2009       Impact factor: 23.643

10.  Phosphatidylethanolamine is required for in vivo function of the membrane-associated lactose permease of Escherichia coli.

Authors:  M Bogdanov; W Dowhan
Journal:  J Biol Chem       Date:  1995-01-13       Impact factor: 5.157

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  29 in total

Review 1.  Biogenesis of cbb(3)-type cytochrome c oxidase in Rhodobacter capsulatus.

Authors:  Seda Ekici; Grzegorz Pawlik; Eva Lohmeyer; Hans-Georg Koch; Fevzi Daldal
Journal:  Biochim Biophys Acta       Date:  2011-11-04

Review 2.  Molecular genetic and biochemical approaches for defining lipid-dependent membrane protein folding.

Authors:  William Dowhan; Mikhail Bogdanov
Journal:  Biochim Biophys Acta       Date:  2011-09-17

3.  Lipids modulate the conformational dynamics of a secondary multidrug transporter.

Authors:  Chloé Martens; Richard A Stein; Matthieu Masureel; Aurélie Roth; Smriti Mishra; Rosie Dawaliby; Albert Konijnenberg; Frank Sobott; Cédric Govaerts; Hassane S Mchaourab
Journal:  Nat Struct Mol Biol       Date:  2016-07-11       Impact factor: 15.369

4.  Fluorinated colloidal gold immunolabels for imaging select proteins in parallel with lipids using high-resolution secondary ion mass spectrometry.

Authors:  Robert L Wilson; Jessica F Frisz; William P Hanafin; Kevin J Carpenter; Ian D Hutcheon; Peter K Weber; Mary L Kraft
Journal:  Bioconjug Chem       Date:  2012-02-15       Impact factor: 4.774

5.  LysPGS formation in Listeria monocytogenes has broad roles in maintaining membrane integrity beyond antimicrobial peptide resistance.

Authors:  Kiley Dare; Jennifer Shepherd; Hervé Roy; Stephanie Seveau; Michael Ibba
Journal:  Virulence       Date:  2014-03-06       Impact factor: 5.882

6.  A subset of annular lipids is linked to the flippase activity of an ABC transporter.

Authors:  Chérine Bechara; Anne Nöll; Nina Morgner; Matteo T Degiacomi; Robert Tampé; Carol V Robinson
Journal:  Nat Chem       Date:  2015-02-02       Impact factor: 24.427

7.  Proper fatty acid composition rather than an ionizable lipid amine is required for full transport function of lactose permease from Escherichia coli.

Authors:  Heidi Vitrac; Mikhail Bogdanov; William Dowhan
Journal:  J Biol Chem       Date:  2013-01-15       Impact factor: 5.157

8.  Transcriptional regulation of fatty acid cis-trans isomerization in the solvent-tolerant soil bacterium, Pseudomonas putida F1.

Authors:  Tatiana Kondakova; John E Cronan
Journal:  Environ Microbiol       Date:  2019-03-12       Impact factor: 5.491

9.  Lipid-dependent generation of dual topology for a membrane protein.

Authors:  Mikhail Bogdanov; William Dowhan
Journal:  J Biol Chem       Date:  2012-09-10       Impact factor: 5.157

10.  Ligand Induced Conformational Changes of a Membrane Transporter in E. coli Cells Observed with DEER/PELDOR.

Authors:  Benesh Joseph; Arthur Sikora; David S Cafiso
Journal:  J Am Chem Soc       Date:  2016-02-02       Impact factor: 15.419

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