Literature DB >> 21599247

Community detection in graphs using singular value decomposition.

Somwrita Sarkar1, Andy Dong.   

Abstract

A spectral algorithm for community detection is presented. The algorithm consists of three stages: (1) matrix factorization of two matrix forms, square signless Laplacian for unipartite graphs and rectangular adjacency matrix for bipartite graphs, using singular value decompostion (SVD); (2) dimensionality reduction using an optimal linear approximation; and (3) clustering vertices using dot products in reduced dimensional space. The algorithm reveals communities in graphs without placing any restriction on the input network type or the output community type. It is applicable on unipartite or bipartite unweighted or weighted networks. It places no requirement on strict community membership and automatically reveals the number of clusters, their respective sizes and overlaps, and hierarchical modular organization. By representing vertices as vectors in real space, expressed as linear combinations of the orthogonal bases described by SVD, orthogonality becomes the metric for classifying vertices into communities. Results on several test and real world networks are presented, including cases where a mix of disjointed, overlapping, or hierarchical communities are known to exist in the network.

Entities:  

Year:  2011        PMID: 21599247     DOI: 10.1103/PhysRevE.83.046114

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  4 in total

1.  Spectral Characterization of Hierarchical Modularity in Product Architectures.

Authors:  Somwrita Sarkar; Andy Dong; James A Henderson; P A Robinson
Journal:  J Mech Des N Y       Date:  2013-11-07       Impact factor: 3.251

2.  Spectral characterization of hierarchical network modularity and limits of modularity detection.

Authors:  Somwrita Sarkar; James A Henderson; Peter A Robinson
Journal:  PLoS One       Date:  2013-01-28       Impact factor: 3.240

3.  Evidence for localization and urbanization economies in urban scaling.

Authors:  Somwrita Sarkar; Elsa Arcaute; Erez Hatna; Tooran Alizadeh; Glen Searle; Michael Batty
Journal:  R Soc Open Sci       Date:  2020-03-18       Impact factor: 2.963

4.  Network-based identification of signature genes KLF6 and SPOCK1 associated with oral submucous fibrosis.

Authors:  Prithvi Singh; Arpita Rai; Ravins Dohare; Shweta Arora; Sher Ali; Shama Parveen; Mansoor Ali Syed
Journal:  Mol Clin Oncol       Date:  2020-01-30
  4 in total

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