Literature DB >> 21596013

Equilibration of (2)H labeling between body water and free amino acids: enabling studies of proteome synthesis.

Kithsiri Herath1, Gowi Bhat, Paul L Miller, Sheng-Ping Wang, Alison Kulick, Genevieve Andrews-Kelly, Christopher Johnson, Rory J Rohm, Michael E Lassman, Stephen F Previs, Douglas G Johns, Brian K Hubbard, Thomas P Roddy.   

Abstract

Protein synthesis can be estimated by measuring the incorporation of a labeled amino acid into a proteolytic peptide. Although prelabeled amino acids are typically administered, recent studies have tested (2)H(2)O; the assumption is that there is rapid equilibration of (2)H (in body water) with the carbon-bound hydrogens of amino acids before those amino acids are incorporated into a protein(s). We have determined the temporal changes in (2)H labeling of body water and amino acids which should build confidence in (2)H(2)O-based studies of protein synthesis when one aims to measure the (2)H labeling of proteolytic peptides.
Copyright © 2011 Elsevier Inc. All rights reserved.

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Year:  2011        PMID: 21596013     DOI: 10.1016/j.ab.2011.04.031

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  8 in total

1.  Quantifying apoprotein synthesis in rodents: coupling LC-MS/MS analyses with the administration of labeled water.

Authors:  Haihong Zhou; Wenyu Li; Sheng-Ping Wang; Vivienne Mendoza; Raymond Rosa; James Hubert; Kithsiri Herath; Theresa McLaughlin; Rory J Rohm; Michael E Lassman; Kenny K Wong; Douglas G Johns; Stephen F Previs; Brian K Hubbard; Thomas P Roddy
Journal:  J Lipid Res       Date:  2012-03-03       Impact factor: 5.922

Review 2.  Stable isotope tracers and exercise physiology: past, present and future.

Authors:  Daniel J Wilkinson; Matthew S Brook; Kenneth Smith; Philip J Atherton
Journal:  J Physiol       Date:  2016-10-09       Impact factor: 5.182

3.  Plasma proteome dynamics: analysis of lipoproteins and acute phase response proteins with 2H2O metabolic labeling.

Authors:  Ling Li; Belinda Willard; Nadia Rachdaoui; John P Kirwan; Rovshan G Sadygov; William C Stanley; Stephen Previs; Arthur J McCullough; Takhar Kasumov
Journal:  Mol Cell Proteomics       Date:  2012-03-05       Impact factor: 5.911

4.  Tracer-based estimates of protein flux in cases of incomplete product renewal: evidence and implications of heterogeneity in collagen turnover.

Authors:  Haihong Zhou; Sheng-Ping Wang; Kithsiri Herath; Takhar Kasumov; Rovshan G Sadygov; Stephen F Previs; David E Kelley
Journal:  Am J Physiol Endocrinol Metab       Date:  2015-05-26       Impact factor: 4.310

5.  Partial Isotope Profiles Are Sufficient for Protein Turnover Analysis Using Closed-Form Equations of Mass Isotopomer Dynamics.

Authors:  Rovshan G Sadygov
Journal:  Anal Chem       Date:  2020-10-21       Impact factor: 6.986

6.  Accelerated turnover of MHC class II molecules in nonobese diabetic mice is developmentally and environmentally regulated in vivo and dispensable for autoimmunity.

Authors:  Alessandra De Riva; Mark C Varley; Leslie J Bluck; Anne Cooke; Michael J Deery; Robert Busch
Journal:  J Immunol       Date:  2013-05-15       Impact factor: 5.422

Review 7.  MHC Class II Protein Turnover In vivo and Its Relevance for Autoimmunity in Non-Obese Diabetic Mice.

Authors:  Alessandra De Riva; Robert Busch
Journal:  Front Immunol       Date:  2013-11-25       Impact factor: 7.561

Review 8.  Historical and contemporary stable isotope tracer approaches to studying mammalian protein metabolism.

Authors:  Daniel James Wilkinson
Journal:  Mass Spectrom Rev       Date:  2016-05-16       Impact factor: 10.946

  8 in total

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