Literature DB >> 21589618

Diacetamidinium sulfate.

Zdeněk Jalový, Aleš Růžička.   

Abstract

In the crystal structure of the title compound, 2C(2)H(7)N(2) (+)·SO(4) (2-), which contains four cations and two anions in the asymmetric unit, the ions are inter-connected by an extensive n class="Chemical">hydrogen-bonding system whereby two of the O atoms of sulfate ion are hydrogen-bonded to the amidinium H atoms of two cations, leading to the formation of two eight-membered rings. The two remaining O atoms inter-connect two H atoms of acetamidinium cations, forming an infinite chain. The C⋯N separations within the H(2)N⋯C⋯NH(2) moieties are similar, with an average value of 1.305 (2) Å, which is in good agreement with a delocalization model.

Entities:  

Year:  2010        PMID: 21589618      PMCID: PMC3011428          DOI: 10.1107/S1600536810049160

Source DB:  PubMed          Journal:  Acta Crystallogr Sect E Struct Rep Online        ISSN: 1600-5368


Related literature

For preparation, reactivity and behaviour of similar compounds, see: Jalový et al. (2005 ▶); Latypov et al. (1998 ▶); Taylor & Ehrhart (1960 ▶). For related structures, see: Calov & Jost (1990 ▶); Cannon et al. (1976 ▶); Emirdag-Eanes & Ibers (2002) ▶; Ferretti et al. (2004 ▶); Jalový et al. (2009 ▶); Tominey et al. (2006 ▶).

Experimental

Crystal data

2C2H7N2SO4 2− M = 214.26 Triclinic, a = 8.0961 (3) Å b = 11.1668 (4) Å c = 11.8821 (6) Å α = 96.199 (4)° β = 105.905 (3)° γ = 105.615 (4)° V = 975.63 (8) Å3 Z = 4 Mo Kα radiation μ = 0.33 mm−1 T = 150 K 0.44 × 0.23 × 0.21 mm

Data collection

Bruker–Nonius KappaCCD area-detector diffractometer Absorption correction: Gaussian (Coppens, 1970 ▶) T min = 0.915, T max = 0.958 20866 measured reflections 4459 independent reflections 3623 reflections with I > 2σ(I) R int = 0.040

Refinement

R[F 2 > 2σ(F 2)] = 0.040 wR(F 2) = 0.105 S = 1.10 4459 reflections 239 parameters H-atom parameters constrained Δρmax = 0.23 e Å−3 Δρmin = −0.46 e Å−3 Data collection: COLLECT (Hooft, 1998 ▶) and DENZO (Otwin­owski & Minor, 1997 ▶); cell refinement: COLLECT and DEn class="Chemical">NZO; data reduction: COLLECT and DENZO; program(s) used to solve structure: SIR92 (Altomare et al., 1994 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶); software used to prepare material for publication: SHELXL97. Crystal structure: contains datablocks I, global. DOI: 10.1107/S1600536810049160/rk2242sup1.cif Structure factors: contains datablocks I. DOI: 10.1107/S1600536810049160/rk2242Isup2.hkl Additional supplementary materials: crystallographic information; 3D view; checkCIF report
2C2H7N2+·O4S2Z = 4
Mr = 214.26F(000) = 456
Triclinic, P1Dx = 1.459 Mg m3
Hall symbol: -P 1Melting point = 483–485 K
a = 8.0961 (3) ÅMo Kα radiation, λ = 0.71073 Å
b = 11.1668 (4) ÅCell parameters from 20921 reflections
c = 11.8821 (6) Åθ = 1–27.5°
α = 96.199 (4)°µ = 0.33 mm1
β = 105.905 (3)°T = 150 K
γ = 105.615 (4)°Block, colourless
V = 975.63 (8) Å30.44 × 0.23 × 0.21 mm
Bruker–Nonius KappaCCD area-detector diffractometer4459 independent reflections
Radiation source: fine–focus sealed tube3623 reflections with I > 2σ(I)
graphiteRint = 0.040
Detector resolution: 9.091 pixels mm-1θmax = 27.5°, θmin = 2.4°
φ– and ω–scans to fill the Ewald sphereh = −10→10
Absorption correction: gaussian (Coppens, 1970)k = −14→14
Tmin = 0.915, Tmax = 0.958l = −15→15
20866 measured reflections
Refinement on F2Primary atom site location: structure-invariant direct methods
Least-squares matrix: fullSecondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.040Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.105H-atom parameters constrained
S = 1.10w = 1/[σ2(Fo2) + (0.0486P)2 + 0.6492P] where P = (Fo2 + 2Fc2)/3
4459 reflections(Δ/σ)max < 0.001
239 parametersΔρmax = 0.23 e Å3
0 restraintsΔρmin = −0.46 e Å3
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell s.u.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R–factor wR and goodness of fit S are based on F2, conventional R–factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2σ(F2) is used only for calculating R–factors(gt) etc. and is not relevant to the choice of reflections for refinement. R–factors based on F2 are statistically about twice as large as those based on F, and R–factors based on ALL data will be even larger.
xyzUiso*/Ueq
S10.79775 (6)0.46840 (4)0.72331 (4)0.01727 (12)
S20.19510 (6)0.03481 (4)0.78098 (4)0.01627 (12)
O60.16125 (19)0.02135 (13)0.89534 (12)0.0213 (3)
O70.1162 (2)−0.08915 (13)0.69712 (12)0.0239 (3)
O30.71625 (18)0.37497 (12)0.60982 (12)0.0209 (3)
O20.71148 (19)0.42348 (14)0.81242 (12)0.0235 (3)
O40.99312 (18)0.48642 (13)0.76995 (12)0.0219 (3)
O50.11266 (18)0.12598 (12)0.72686 (12)0.0208 (3)
N12−0.0434 (2)0.77755 (16)0.91285 (15)0.0216 (3)
H12A−0.12510.72710.85090.026*
H12B0.01030.85390.90860.026*
O80.39298 (18)0.07972 (14)0.80283 (12)0.0240 (3)
N180.4617 (2)0.13845 (16)0.59125 (15)0.0215 (3)
H18A0.45450.11150.65540.026*
H18B0.55200.20170.59390.026*
N150.3313 (2)0.36087 (16)0.70691 (15)0.0215 (3)
H15A0.44080.39390.75350.026*
H15B0.26100.29510.72050.026*
O10.7676 (2)0.59000 (13)0.70173 (12)0.0242 (3)
N160.3762 (2)0.51104 (15)0.59222 (15)0.0213 (3)
H16A0.48610.54550.63770.026*
H16B0.33430.54210.53150.026*
N11−0.0796 (2)0.62260 (16)1.02350 (15)0.0215 (3)
H11A−0.16180.57040.96280.026*
H11B−0.04930.59901.09070.026*
N130.2530 (2)0.72388 (16)0.79442 (15)0.0225 (4)
H13A0.21780.77670.75370.027*
H13B0.18490.64650.78010.027*
N140.5176 (2)0.87828 (16)0.90289 (15)0.0227 (4)
H14A0.48600.93320.86360.027*
H14B0.62010.90010.95850.027*
C70.3355 (3)0.08310 (17)0.48927 (17)0.0183 (4)
N170.1957 (2)−0.01346 (15)0.48128 (15)0.0215 (3)
H17A0.1850−0.04240.54400.026*
H17B0.1146−0.04800.41320.026*
C30.4094 (3)0.76088 (18)0.87780 (17)0.0195 (4)
C50.2718 (3)0.41071 (17)0.61547 (17)0.0179 (4)
C1−0.0009 (3)0.73845 (18)1.01366 (17)0.0182 (4)
C60.0825 (3)0.3512 (2)0.53533 (19)0.0242 (4)
H6A0.07130.27080.49090.036*
H6B0.05200.40560.48110.036*
H6C0.00200.33900.58220.036*
C40.4675 (3)0.6675 (2)0.9475 (2)0.0314 (5)
H4A0.43600.67351.01970.047*
H4B0.59600.68570.96700.047*
H4C0.40790.58340.90070.047*
C20.1430 (3)0.82735 (19)1.11939 (18)0.0235 (4)
H2A0.25830.81901.12050.035*
H2B0.11890.80741.19110.035*
H2C0.14420.91281.11460.035*
C80.3526 (3)0.1306 (2)0.37894 (18)0.0278 (5)
H8A0.28180.18690.36200.042*
H8B0.30990.06020.31310.042*
H8C0.47710.17530.39070.042*
U11U22U33U12U13U23
S10.0150 (2)0.0162 (2)0.0149 (2)−0.00007 (17)0.00017 (17)0.00432 (17)
S20.0153 (2)0.0161 (2)0.0141 (2)0.00153 (17)0.00173 (17)0.00533 (16)
O60.0210 (7)0.0234 (7)0.0168 (7)0.0018 (5)0.0056 (5)0.0072 (5)
O70.0275 (8)0.0182 (7)0.0197 (7)0.0040 (6)0.0012 (6)0.0022 (5)
O30.0208 (7)0.0179 (7)0.0167 (6)0.0004 (5)0.0004 (5)0.0026 (5)
O20.0189 (7)0.0289 (8)0.0194 (7)0.0017 (6)0.0048 (6)0.0090 (6)
O40.0154 (7)0.0233 (7)0.0210 (7)0.0006 (5)0.0008 (5)0.0072 (5)
O50.0201 (7)0.0172 (7)0.0211 (7)0.0030 (5)0.0015 (5)0.0079 (5)
N120.0230 (9)0.0174 (8)0.0190 (8)0.0015 (6)0.0028 (7)0.0034 (6)
O80.0158 (7)0.0305 (8)0.0223 (7)0.0027 (6)0.0035 (6)0.0102 (6)
N180.0202 (8)0.0201 (8)0.0193 (8)−0.0008 (6)0.0059 (7)0.0036 (6)
N150.0186 (8)0.0202 (8)0.0233 (8)0.0024 (6)0.0052 (7)0.0083 (7)
O10.0267 (8)0.0163 (7)0.0222 (7)0.0029 (6)−0.0001 (6)0.0041 (5)
N160.0206 (8)0.0210 (8)0.0187 (8)0.0035 (7)0.0020 (7)0.0081 (6)
N110.0203 (8)0.0217 (8)0.0178 (8)0.0029 (7)0.0010 (7)0.0063 (6)
N130.0194 (8)0.0176 (8)0.0252 (9)0.0022 (6)0.0026 (7)0.0043 (7)
N140.0187 (8)0.0224 (8)0.0209 (8)0.0021 (7)0.0003 (7)0.0049 (7)
C70.0184 (9)0.0173 (9)0.0202 (9)0.0067 (7)0.0068 (7)0.0038 (7)
N170.0188 (8)0.0229 (8)0.0167 (8)0.0003 (7)0.0022 (6)0.0036 (6)
C30.0198 (9)0.0209 (9)0.0186 (9)0.0063 (7)0.0076 (7)0.0035 (7)
C50.0192 (9)0.0161 (9)0.0181 (9)0.0058 (7)0.0064 (7)0.0009 (7)
C10.0158 (9)0.0203 (9)0.0197 (9)0.0068 (7)0.0064 (7)0.0032 (7)
C60.0181 (10)0.0256 (10)0.0255 (10)0.0040 (8)0.0043 (8)0.0049 (8)
C40.0303 (12)0.0270 (11)0.0352 (12)0.0107 (9)0.0045 (10)0.0099 (9)
C20.0195 (10)0.0243 (10)0.0215 (10)0.0044 (8)0.0028 (8)−0.0003 (8)
C80.0304 (12)0.0301 (11)0.0216 (10)0.0045 (9)0.0096 (9)0.0083 (8)
S1—O41.4743 (14)N13—H13A0.8600
S1—O31.4766 (14)N13—H13B0.8600
S1—O11.4795 (14)N14—C31.315 (3)
S1—O21.4806 (14)N14—H14A0.8600
S2—O51.4722 (14)N14—H14B0.8600
S2—O61.4732 (13)C7—N171.309 (2)
S2—O71.4813 (14)C7—C81.493 (3)
S2—O81.4822 (14)N17—H17A0.8600
N12—C11.308 (3)N17—H17B0.8600
N12—H12A0.8600C3—C41.494 (3)
N12—H12B0.8600C5—C61.487 (3)
N18—C71.309 (3)C1—C21.492 (3)
N18—H18A0.8600C6—H6A0.9600
N18—H18B0.8600C6—H6B0.9600
N15—C51.308 (3)C6—H6C0.9600
N15—H15A0.8600C4—H4A0.9600
N15—H15B0.8600C4—H4B0.9600
N16—C51.316 (2)C4—H4C0.9600
N16—H16A0.8600C2—H2A0.9600
N16—H16B0.8600C2—H2B0.9600
N11—C11.313 (3)C2—H2C0.9600
N11—H11A0.8600C8—H8A0.9600
N11—H11B0.8600C8—H8B0.9600
N13—C31.303 (3)C8—H8C0.9600
O4—S1—O3110.00 (8)C7—N17—H17A120.1
O4—S1—O1110.05 (8)C7—N17—H17B119.9
O3—S1—O1108.83 (8)H17A—N17—H17B120.0
O4—S1—O2109.08 (8)N13—C3—N14121.98 (18)
O3—S1—O2110.04 (8)N13—C3—C4119.16 (19)
O1—S1—O2108.83 (9)N14—C3—C4118.87 (19)
O5—S2—O6110.39 (8)N15—C5—N16121.47 (18)
O5—S2—O7108.65 (8)N15—C5—C6119.04 (17)
O6—S2—O7110.07 (8)N16—C5—C6119.49 (17)
O5—S2—O8109.79 (8)N12—C1—N11121.67 (18)
O6—S2—O8108.87 (8)N12—C1—C2119.00 (17)
O7—S2—O8109.07 (9)N11—C1—C2119.31 (17)
C1—N12—H12A120.1C5—C6—H6A109.5
C1—N12—H12B119.9C5—C6—H6B109.5
H12A—N12—H12B120.0H6A—C6—H6B109.5
C7—N18—H18A120.1C5—C6—H6C109.5
C7—N18—H18B119.8H6A—C6—H6C109.5
H18A—N18—H18B120.1H6B—C6—H6C109.5
C5—N15—H15A120.0C3—C4—H4A109.5
C5—N15—H15B120.1C3—C4—H4B109.5
H15A—N15—H15B119.9H4A—C4—H4B109.5
C5—N16—H16A120.1C3—C4—H4C109.5
C5—N16—H16B119.9H4A—C4—H4C109.5
H16A—N16—H16B120.0H4B—C4—H4C109.5
C1—N11—H11A120.0C1—C2—H2A109.5
C1—N11—H11B120.0C1—C2—H2B109.5
H11A—N11—H11B120.0H2A—C2—H2B109.5
C3—N13—H13A120.1C1—C2—H2C109.5
C3—N13—H13B119.9H2A—C2—H2C109.5
H13A—N13—H13B120.0H2B—C2—H2C109.5
C3—N14—H14A120.0C7—C8—H8A109.5
C3—N14—H14B120.0C7—C8—H8B109.5
H14A—N14—H14B120.0H8A—C8—H8B109.5
N18—C7—N17121.79 (18)C7—C8—H8C109.5
N18—C7—C8119.04 (18)H8A—C8—H8C109.5
N17—C7—C8119.17 (18)H8B—C8—H8C109.5
D—H···AD—HH···AD···AD—H···A
N12—H12A···O1i0.862.022.838 (2)158
N12—H12A···S1i0.862.933.6038 (17)136
N12—H12B···O6ii0.861.992.843 (2)172
N12—H12B···S2ii0.862.983.7523 (17)150
N18—H18A···O80.861.992.826 (2)164
N18—H18A···S20.862.903.6006 (17)140
N18—H18B···O30.861.992.823 (2)164
N15—H15A···O20.862.032.841 (2)157
N15—H15A···S10.862.923.5841 (17)136
N15—H15B···S20.863.013.7829 (17)150
N15—H15B···O50.861.972.817 (2)169
N16—H16A···O10.862.092.915 (2)160
N16—H16A···S10.862.853.5245 (18)137
N16—H16B···O3iii0.862.002.852 (2)170
N16—H16B···S1iii0.862.903.6821 (17)152
N11—H11A···O2i0.862.102.922 (2)161
N11—H11A···S1i0.862.843.5335 (17)138
N11—H11B···O4iv0.862.012.856 (2)170
N11—H11B···S1iv0.862.883.6657 (17)152
N13—H13A···O7ii0.861.992.826 (2)165
N13—H13A···S2ii0.862.933.6408 (18)142
N13—H13B···O4i0.861.992.835 (2)165
N14—H14A···O8ii0.862.092.938 (2)167
N14—H14A···S2ii0.862.873.5920 (18)143
N14—H14B···O6iv0.862.022.863 (2)167
N14—H14B···S2iv0.862.963.6973 (17)145
N17—H17A···O70.862.122.964 (2)167
N17—H17B···S2v0.862.953.7158 (17)149
N17—H17B···O5v0.862.012.861 (2)168
N17—H17B···S2v0.862.953.7158 (17)149
Table 1

Hydrogen-bond geometry (Å, °)

D—H⋯AD—HH⋯ADAD—H⋯A
N12—H12A⋯O1i0.862.022.838 (2)158
N12—H12A⋯S1i0.862.933.6038 (17)136
N12—H12B⋯O6ii0.861.992.843 (2)172
N12—H12B⋯S2ii0.862.983.7523 (17)150
N18—H18A⋯O80.861.992.826 (2)164
N18—H18A⋯S20.862.903.6006 (17)140
N18—H18B⋯O30.861.992.823 (2)164
N15—H15A⋯O20.862.032.841 (2)157
N15—H15A⋯S10.862.923.5841 (17)136
N15—H15B⋯S20.863.013.7829 (17)150
N15—H15B⋯O50.861.972.817 (2)169
N16—H16A⋯O10.862.092.915 (2)160
N16—H16A⋯S10.862.853.5245 (18)137
N16—H16B⋯O3iii0.862.002.852 (2)170
N16—H16B⋯S1iii0.862.903.6821 (17)152
N11—H11A⋯O2i0.862.102.922 (2)161
N11—H11A⋯S1i0.862.843.5335 (17)138
N11—H11B⋯O4iv0.862.012.856 (2)170
N11—H11B⋯S1iv0.862.883.6657 (17)152
N13—H13A⋯O7ii0.861.992.826 (2)165
N13—H13A⋯S2ii0.862.933.6408 (18)142
N13—H13B⋯O4i0.861.992.835 (2)165
N14—H14A⋯O8ii0.862.092.938 (2)167
N14—H14A⋯S2ii0.862.873.5920 (18)143
N14—H14B⋯O6iv0.862.022.863 (2)167
N14—H14B⋯S2iv0.862.963.6973 (17)145
N17—H17A⋯O70.862.122.964 (2)167
N17—H17B⋯S2v0.862.953.7158 (17)149
N17—H17B⋯O5v0.862.012.861 (2)168
N17—H17B⋯S2v0.862.953.7158 (17)149

Symmetry codes: (i) ; (ii) ; (iii) ; (iv) ; (v) .

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1.  A short history of SHELX.

Authors:  George M Sheldrick
Journal:  Acta Crystallogr A       Date:  2007-12-21       Impact factor: 2.290

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Authors:  Alan F Tominey; Paul H Docherty; Georgina M Rosair; Romain Quenardelle; Arno Kraft
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3.  Conversion of a Re(IV) tetrahedral cluster to a Re(III) octahedral cluster: synthesis of [(CH3)C(NH2)(2)](4)[Re(6)Se(8)(CN)(6)] by a solvothermal route.

Authors:  Mehtap Emirdag-Eanes; James A Ibers
Journal:  Inorg Chem       Date:  2002-12-02       Impact factor: 5.165

4.  Structure validation in chemical crystallography.

Authors:  Anthony L Spek
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2009-01-20
  4 in total
  1 in total

1.  Synthesis and properties of acetamidinium salts.

Authors:  Zdeněk Jalový; Robert Matyáš; Jan Ottis; Aleš Růžička; Petr Simůnek; Miroslav Polášek
Journal:  Chem Cent J       Date:  2011-12-12       Impact factor: 4.215

  1 in total

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