| Literature DB >> 21589567 |
Yong Wang, Kaiqing Fan, Chenghong Li, Changhua Ge.
Abstract
In the title compound, C(13)H(9)N(3)O(2), the aromatic rings are twisted with respect to each other, making a dihedral angle of 49.41 (9)°. The nitro group and the nitrile group are nearly in the plane of the benzonitrile ring, the largest deviation from the plane being 0.123 (1) Å. There is an intra-molecular N-H⋯O hydrogen bond forming an S(6) ring. Weak inter-molecular C-H⋯O hydrogen bonds link the mol-ecules into a chain parallel to the c axis. Futhermore, slipped π-π inter-actions between symmetry-related phenyl rings [centroid-centroid distance 3.808 (1) Å, inter-planar distance 3.544 (8) Å with an offset of 21.5°] stabilize the structure.Entities:
Year: 2010 PMID: 21589567 PMCID: PMC3011760 DOI: 10.1107/S1600536810043862
Source DB: PubMed Journal: Acta Crystallogr Sect E Struct Rep Online ISSN: 1600-5368
| C13H9N3O2 | |
| Monoclinic, | Mo |
| Hall symbol: -P 2ybc | Cell parameters from 25 reflections |
| θ = 9–13° | |
| µ = 0.10 mm−1 | |
| β = 109.04 (3)° | Block, colourless |
| 0.30 × 0.30 × 0.10 mm | |
| Enraf–Nonius CAD-4 diffractometer | 1546 reflections with |
| Radiation source: fine-focus sealed tube | |
| graphite | θmax = 25.3°, θmin = 1.5° |
| ω/2θ scans | |
| Absorption correction: ψ scan (North | |
| 4199 measured reflections | 3 standard reflections every 200 reflections |
| 2082 independent reflections | intensity decay: 1% |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: inferred from neighbouring sites | |
| H-atom parameters constrained | |
| 2082 reflections | (Δ/σ)max < 0.001 |
| 163 parameters | Δρmax = 0.19 e Å−3 |
| 0 restraints | Δρmin = −0.16 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| Refinement. Refinement of |
| O1 | 0.91767 (8) | 0.4271 (2) | 0.39718 (10) | 0.0665 (4) | |
| O2 | 0.84253 (9) | 0.43363 (19) | 0.20463 (10) | 0.0659 (4) | |
| N1 | 0.82164 (10) | 0.5168 (2) | 0.54802 (11) | 0.0545 (4) | |
| H1 | 0.8774 | 0.4845 | 0.5388 | 0.065* | |
| N2 | 0.84229 (10) | 0.45587 (19) | 0.30832 (11) | 0.0485 (4) | |
| N3 | 0.43509 (11) | 0.6904 (2) | 0.03546 (14) | 0.0699 (5) | |
| C1 | 0.74708 (13) | 0.4539 (2) | 0.70743 (15) | 0.0570 (5) | |
| H1B | 0.6921 | 0.3979 | 0.6517 | 0.068* | |
| C2 | 0.75504 (15) | 0.4625 (3) | 0.82822 (17) | 0.0669 (5) | |
| H2A | 0.7042 | 0.4143 | 0.8535 | 0.080* | |
| C3 | 0.83667 (16) | 0.5411 (3) | 0.91186 (16) | 0.0695 (6) | |
| H3A | 0.8414 | 0.5451 | 0.9933 | 0.083* | |
| C4 | 0.91129 (15) | 0.6136 (3) | 0.87473 (16) | 0.0656 (5) | |
| H4A | 0.9671 | 0.6659 | 0.9314 | 0.079* | |
| C5 | 0.90432 (12) | 0.6097 (3) | 0.75389 (14) | 0.0537 (4) | |
| H5A | 0.9548 | 0.6605 | 0.7290 | 0.064* | |
| C6 | 0.82202 (11) | 0.5299 (2) | 0.67003 (13) | 0.0463 (4) | |
| C7 | 0.74482 (11) | 0.5487 (2) | 0.44502 (13) | 0.0438 (4) | |
| C8 | 0.65218 (12) | 0.6207 (2) | 0.44808 (14) | 0.0489 (4) | |
| H8A | 0.6447 | 0.6444 | 0.5230 | 0.059* | |
| C9 | 0.57426 (12) | 0.6561 (2) | 0.34586 (14) | 0.0506 (4) | |
| H9A | 0.5150 | 0.7039 | 0.3520 | 0.061* | |
| C10 | 0.58206 (11) | 0.6214 (2) | 0.23110 (14) | 0.0461 (4) | |
| C11 | 0.67092 (11) | 0.5533 (2) | 0.22313 (13) | 0.0455 (4) | |
| H11A | 0.6771 | 0.5300 | 0.1474 | 0.055* | |
| C12 | 0.75095 (11) | 0.5196 (2) | 0.32739 (13) | 0.0432 (4) | |
| C13 | 0.49993 (12) | 0.6596 (2) | 0.12224 (15) | 0.0524 (4) |
| O1 | 0.0436 (7) | 0.1033 (11) | 0.0496 (7) | 0.0174 (7) | 0.0112 (5) | −0.0019 (6) |
| O2 | 0.0553 (7) | 0.1003 (11) | 0.0471 (7) | 0.0071 (7) | 0.0237 (6) | −0.0053 (6) |
| N1 | 0.0437 (7) | 0.0796 (11) | 0.0403 (7) | 0.0117 (7) | 0.0140 (6) | 0.0013 (7) |
| N2 | 0.0431 (7) | 0.0617 (9) | 0.0421 (7) | 0.0019 (7) | 0.0157 (6) | −0.0028 (6) |
| N3 | 0.0545 (9) | 0.0920 (13) | 0.0557 (9) | 0.0140 (9) | 0.0076 (8) | 0.0037 (9) |
| C1 | 0.0556 (10) | 0.0621 (11) | 0.0535 (10) | −0.0002 (9) | 0.0182 (8) | 0.0053 (9) |
| C2 | 0.0700 (12) | 0.0752 (13) | 0.0661 (12) | 0.0131 (11) | 0.0369 (10) | 0.0185 (10) |
| C3 | 0.0884 (15) | 0.0803 (14) | 0.0438 (10) | 0.0311 (12) | 0.0268 (10) | 0.0111 (9) |
| C4 | 0.0634 (11) | 0.0753 (13) | 0.0466 (10) | 0.0174 (10) | 0.0022 (9) | −0.0035 (9) |
| C5 | 0.0428 (9) | 0.0686 (11) | 0.0476 (9) | 0.0092 (8) | 0.0120 (7) | 0.0026 (8) |
| C6 | 0.0449 (8) | 0.0540 (10) | 0.0394 (8) | 0.0119 (8) | 0.0130 (7) | 0.0038 (7) |
| C7 | 0.0430 (8) | 0.0468 (9) | 0.0418 (8) | −0.0007 (7) | 0.0140 (7) | −0.0001 (7) |
| C8 | 0.0485 (9) | 0.0578 (10) | 0.0431 (9) | 0.0042 (8) | 0.0189 (7) | −0.0009 (8) |
| C9 | 0.0431 (9) | 0.0561 (10) | 0.0543 (10) | 0.0058 (8) | 0.0181 (8) | 0.0022 (8) |
| C10 | 0.0395 (8) | 0.0509 (10) | 0.0450 (9) | −0.0007 (7) | 0.0102 (7) | 0.0020 (7) |
| C11 | 0.0461 (9) | 0.0509 (10) | 0.0394 (8) | −0.0027 (7) | 0.0140 (7) | −0.0013 (7) |
| C12 | 0.0389 (8) | 0.0472 (9) | 0.0442 (8) | 0.0013 (7) | 0.0144 (7) | −0.0013 (7) |
| C13 | 0.0449 (9) | 0.0615 (11) | 0.0502 (9) | 0.0041 (8) | 0.0148 (8) | 0.0021 (8) |
| O1—N2 | 1.2352 (16) | C4—C5 | 1.379 (2) |
| O2—N2 | 1.2206 (16) | C4—H4A | 0.9300 |
| N1—C7 | 1.3483 (18) | C5—C6 | 1.382 (2) |
| N1—C6 | 1.4232 (19) | C5—H5A | 0.9300 |
| N1—H1 | 0.8600 | C7—C12 | 1.418 (2) |
| N2—C12 | 1.4529 (19) | C7—C8 | 1.420 (2) |
| N3—C13 | 1.142 (2) | C8—C9 | 1.356 (2) |
| C1—C2 | 1.377 (2) | C8—H8A | 0.9300 |
| C1—C6 | 1.385 (2) | C9—C10 | 1.401 (2) |
| C1—H1B | 0.9300 | C9—H9A | 0.9300 |
| C2—C3 | 1.371 (3) | C10—C11 | 1.379 (2) |
| C2—H2A | 0.9300 | C10—C13 | 1.438 (2) |
| C3—C4 | 1.369 (3) | C11—C12 | 1.383 (2) |
| C3—H3A | 0.9300 | C11—H11A | 0.9300 |
| C7—N1—C6 | 128.16 (14) | C5—C6—N1 | 117.71 (15) |
| C7—N1—H1 | 115.9 | C1—C6—N1 | 122.08 (15) |
| C6—N1—H1 | 115.9 | N1—C7—C12 | 123.37 (14) |
| O2—N2—O1 | 121.83 (13) | N1—C7—C8 | 121.29 (14) |
| O2—N2—C12 | 118.93 (13) | C12—C7—C8 | 115.30 (14) |
| O1—N2—C12 | 119.24 (13) | C9—C8—C7 | 122.46 (15) |
| C2—C1—C6 | 119.09 (17) | C9—C8—H8A | 118.8 |
| C2—C1—H1B | 120.5 | C7—C8—H8A | 118.8 |
| C6—C1—H1B | 120.5 | C8—C9—C10 | 120.70 (15) |
| C3—C2—C1 | 121.11 (18) | C8—C9—H9A | 119.7 |
| C3—C2—H2A | 119.4 | C10—C9—H9A | 119.7 |
| C1—C2—H2A | 119.4 | C11—C10—C9 | 119.11 (14) |
| C4—C3—C2 | 119.57 (17) | C11—C10—C13 | 119.86 (15) |
| C4—C3—H3A | 120.2 | C9—C10—C13 | 121.01 (15) |
| C2—C3—H3A | 120.2 | C10—C11—C12 | 120.19 (15) |
| C3—C4—C5 | 120.51 (18) | C10—C11—H11A | 119.9 |
| C3—C4—H4A | 119.7 | C12—C11—H11A | 119.9 |
| C5—C4—H4A | 119.7 | C11—C12—C7 | 122.20 (14) |
| C4—C5—C6 | 119.68 (18) | C11—C12—N2 | 115.57 (13) |
| C4—C5—H5A | 120.2 | C7—C12—N2 | 122.22 (13) |
| C6—C5—H5A | 120.2 | N3—C13—C10 | 179.6 (2) |
| C5—C6—C1 | 120.02 (15) | ||
| C6—C1—C2—C3 | −1.5 (3) | C8—C9—C10—C11 | −1.1 (3) |
| C1—C2—C3—C4 | 0.5 (3) | C8—C9—C10—C13 | −179.63 (16) |
| C2—C3—C4—C5 | 0.7 (3) | C9—C10—C11—C12 | 0.1 (2) |
| C3—C4—C5—C6 | −0.8 (3) | C13—C10—C11—C12 | 178.70 (15) |
| C4—C5—C6—C1 | −0.1 (3) | C10—C11—C12—C7 | 1.5 (2) |
| C4—C5—C6—N1 | −175.33 (16) | C10—C11—C12—N2 | −177.32 (14) |
| C2—C1—C6—C5 | 1.3 (3) | N1—C7—C12—C11 | 179.94 (15) |
| C2—C1—C6—N1 | 176.26 (16) | C8—C7—C12—C11 | −2.1 (2) |
| C7—N1—C6—C5 | −137.13 (18) | N1—C7—C12—N2 | −1.3 (2) |
| C7—N1—C6—C1 | 47.8 (3) | C8—C7—C12—N2 | 176.63 (15) |
| C6—N1—C7—C12 | −175.60 (16) | O2—N2—C12—C11 | −1.2 (2) |
| C6—N1—C7—C8 | 6.6 (3) | O1—N2—C12—C11 | 178.27 (15) |
| N1—C7—C8—C9 | 179.15 (16) | O2—N2—C12—C7 | 180.00 (15) |
| C12—C7—C8—C9 | 1.2 (2) | O1—N2—C12—C7 | −0.6 (2) |
| C7—C8—C9—C10 | 0.4 (3) |
| H··· | ||||
| N1—H1···O1 | 0.86 | 1.96 | 2.6280 (18) | 134 |
| C3—H3A···O2i | 0.93 | 2.59 | 3.478 (2) | 159 |
Hydrogen-bond geometry (Å, °)
| H⋯ | ||||
|---|---|---|---|---|
| N1—H1⋯O1 | 0.86 | 1.96 | 2.6280 (18) | 134 |
| C3—H3 | 0.93 | 2.59 | 3.478 (2) | 159 |
Symmetry code: (i) .